RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SRRQ9GZT4 340 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 ZNF552Q9H707 407 aaPredicted RBP11.69□□□□□ -0.54
RFFL-201ENST00000315249 OR4C45A6NMZ5 311 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 GGNBP1Q5YKI7 109 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 Q6ZT83 130 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 RBPMSQ93062 196 aaKnown RBP11.69□□□□□ -0.54
RFFL-201ENST00000315249 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 DHRS7BQ6IAN0 325 aaPredicted RBP11.69□□□□□ -0.54
RFFL-201ENST00000315249 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 ABHD14BQ96IU4 210 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 PPYP01298 95 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 SLC25A53Q5H9E4 307 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 RELL2Q8NC24 303 aaPredicted RBP11.69□□□□□ -0.54
RFFL-201ENST00000315249 RALYQ9UKM9 306 aaKnown RBP11.69□□□□□ -0.54
RFFL-201ENST00000315249 PPP5D1E7EU14 171 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 SFT2D2O95562 160 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 GALP22466 123 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 TPPP2P59282 170 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 DHRS2Q13268 280 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 LINC00596Q86U02 117 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 PRSS27Q9BQR3 290 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 SH2D2AQ9NP31 389 aa11.69□□□□□ -0.54
RFFL-201ENST00000315249 ZGRF1Q86YA3 2104 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 NQO2P16083 231 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 ENDOGQ14249 297 aaKnown RBP11.68□□□□□ -0.54
RFFL-201ENST00000315249 RBPMS2Q6ZRY4 209 aaKnown RBP11.68□□□□□ -0.54
RFFL-201ENST00000315249 FOXH1O75593 365 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 RECKO95980 971 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 NPIPB8E9PQR5 432 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 POLR2GP62487 172 aaKnown RBP eCLIP11.68□□□□□ -0.54
RFFL-201ENST00000315249 APCDD1LQ8NCL9 501 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 FREM3P0C091 2139 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 FAM24AA6NFZ4 105 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
RFFL-201ENST00000315249 CD200P41217 278 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 GLDNQ6ZMI3 551 aaPredicted RBP11.68□□□□□ -0.54
RFFL-201ENST00000315249 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 PHF3Q92576 2039 aaKnown RBP11.68□□□□□ -0.54
RFFL-201ENST00000315249 GPR137Q96N19 417 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 CABLES2Q9BTV7 478 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 VSIG4Q9Y279 399 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 TTRP02766 147 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 TIMM23BQ5SRD1 257 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 PITPNC1Q9UKF7 332 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 MED19A0JLT2 244 aaPredicted RBP11.68□□□□□ -0.54
RFFL-201ENST00000315249 RPL36A-HNRNPH2H7BZ11 118 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 MGST3O14880 152 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 MPV17P39210 176 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 SLC25A47Q6Q0C1 308 aa11.68□□□□□ -0.54
RFFL-201ENST00000315249 CHCHD2Q9Y6H1 151 aaPredicted RBP11.68□□□□□ -0.54
RFFL-201ENST00000315249 A0A0U1RQV5 110 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 LILRB1Q8NHL6 650 aaPredicted RBP11.67□□□□□ -0.54
RFFL-201ENST00000315249 METTL1Q9UBP6 276 aaKnown RBP11.67□□□□□ -0.54
RFFL-201ENST00000315249 OR2W1Q9Y3N9 320 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 SPTAN1Q13813 2472 aaKnown RBP11.67□□□□□ -0.54
RFFL-201ENST00000315249 TRBV5-3A0A0A0MS03 114 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 HBZP02008 142 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 UMODP07911 640 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 FCER1GP30273 86 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 HOXA6P31267 233 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 MMP16P51512 607 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 CTF1Q16619 201 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 RNFT1Q5M7Z0 435 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 CLEC9AQ6UXN8 241 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 CYB5R1Q9UHQ9 305 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 IFNL4K9M1U5 179 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 NDUFA2O43678 99 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 FUT5Q11128 374 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 KIAA0141Q14154 515 aaPredicted RBP11.67□□□□□ -0.54
RFFL-201ENST00000315249 OR4A4PQ8NGN8 299 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 STARD4Q96DR4 205 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 OR2H2O95918 312 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 RBM11P57052 281 aaKnown RBP11.67□□□□□ -0.54
RFFL-201ENST00000315249 TBR1Q16650 682 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 OR4D10Q8NGI6 311 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
RFFL-201ENST00000315249 J3QR06 171 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 TGFAP01135 160 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 CRHP06850 196 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 CD37P11049 281 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 SLC25A42Q86VD7 318 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 BVESQ8NE79 360 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 IGHV3OR16-12A0A075B7B8 117 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 A0A1W2PNV4 684 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 LEUTXA8MZ59 168 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 PTP4A3O75365 173 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 IGKV3-11P04433 115 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 HTR1DP28221 377 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 C11orf87Q6NUJ2 197 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 UFC1Q9Y3C8 167 aa11.67□□□□□ -0.54
RFFL-201ENST00000315249 CDK2AP1O14519 115 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 NCR3LG1Q68D85 454 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 PGLYRP3Q96LB9 341 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 MS4A10Q96PG2 267 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 PRDM14Q9GZV8 571 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 NDUFB6O95139 128 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms