RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 FAM90A16PA6NEW6 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A20PA6NIJ5 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A8PA6NJQ4 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A7PA6NKC0 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 GJE1A6NN92 205 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A22PA8MWA6 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A12PA8MX19 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A5PA8MXJ8 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A23PA8MXZ1 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 H0Y980 276 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 ZNHIT1O43257 154 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A15PP0C7V4 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A13PP0C7W8 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A14PP0C7W9 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FAM90A24PP0C7X0 464 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FGF7P21781 194 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 G0S2P27469 103 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 PLA2G5P39877 138 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 CEACAM6P40199 344 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
SKA3-202ENST00000314759 TMEM267Q0VDI3 215 aaPredicted RBP11.49□□□□□ -0.57
SKA3-202ENST00000314759 GGNQ86UU5 652 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 VSIRQ9H7M9 311 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 CRIM1Q9NZV1 1036 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 FREM2Q5SZK8 3169 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
SKA3-202ENST00000314759 DVL1O14640 695 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 CXCL13O43927 109 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 DFFBO76075 338 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 CYB5R3P00387 301 aaPredicted RBP11.49□□□□□ -0.57
SKA3-202ENST00000314759 CLDN15P56746 228 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 IZUMO4Q1ZYL8 232 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 LBHQ53QV2 105 aaPredicted RBP11.49□□□□□ -0.57
SKA3-202ENST00000314759 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
SKA3-202ENST00000314759 C1QTNF5Q9BXJ0 243 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 WDR54Q9H977 334 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 TMEM242Q9NWH2 141 aa11.49□□□□□ -0.57
SKA3-202ENST00000314759 A0A0G2JMM0 328 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 A0A1W2PPB8 328 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 A0A1W2PRS3 328 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 KIR3DP1A8MWS1 328 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 DNPH1O43598 174 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 IFNA5P01569 189 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 BCL2P10415 239 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 PCBD1P61457 104 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 TLE1Q04724 770 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 CLEC12BQ2HXU8 276 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 SLC25A24Q6NUK1 477 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 LCN15Q6UWW0 184 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 NECAP1Q8NC96 275 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 IL22RA2Q969J5 263 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 GPR146Q96CH1 333 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 TMEM68Q96MH6 324 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 DDA1Q9BW61 102 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 GPR35Q9HC97 309 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 CISD1Q9NZ45 108 aaKnown RBP11.48□□□□□ -0.57
SKA3-202ENST00000314759 TRBV24-1A0A075B6N3 115 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 CYC1P08574 325 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 MMP7P09237 267 aaPredicted RBP11.48□□□□□ -0.57
SKA3-202ENST00000314759 F2RP25116 425 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 GPM6AP51674 278 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 FGF12P61328 243 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 CLN3Q13286 438 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 P2RY6Q15077 328 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 RNPS1Q15287 305 aaKnown RBP11.48□□□□□ -0.57
SKA3-202ENST00000314759 ZNF726P1Q15940 193 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 ABLIM2Q6H8Q1 611 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 SLC23A3Q6PIS1 610 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 PCSK4Q6UW60 755 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 SSX7Q7RTT5 188 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 OR56B2PQ8NGI1 322 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 SDF2L1Q9HCN8 221 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 ATP23Q9Y6H3 246 aa11.48□□□□□ -0.57
SKA3-202ENST00000314759 PNRC1Q12796 327 aaPredicted RBP11.47□□□□□ -0.57
SKA3-202ENST00000314759 C20orf204Q6ZNR8 217 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 Q6ZRM9 215 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 RPS19BP1Q86WX3 136 aaKnown RBP11.47□□□□□ -0.57
SKA3-202ENST00000314759 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 OR2V1Q8NHB1 315 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 NEK7Q8TDX7 302 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 MTCH1Q9NZJ7 389 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 KIR2DS1A0A191URI9 304 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 IFNL4K9M1U5 179 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
SKA3-202ENST00000314759 IGHV3-9P01782 118 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 COX5BP10606 129 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 KIR2DS4P43632 304 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 KIR2DS1Q14954 304 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 ZNF787Q6DD87 383 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 OR10A7Q8NGE5 316 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 RNASEH2CQ8TDP1 164 aaKnown RBP11.47□□□□□ -0.57
SKA3-202ENST00000314759 NOL4LQ96MY1 436 aaPredicted RBP11.47□□□□□ -0.57
SKA3-202ENST00000314759 ACTR3CQ9C0K3 210 aaPredicted RBP11.47□□□□□ -0.57
SKA3-202ENST00000314759 LRFN1Q9P244 771 aa11.47□□□□□ -0.57
SKA3-202ENST00000314759 PRDX4Q13162 271 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 PRSS8Q16651 343 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 RIPPLY2Q5TAB7 128 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 COLCA1Q6ZS62 124 aa11.46□□□□□ -0.57
SKA3-202ENST00000314759 OR51H1Q8NH63 302 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms