RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 SYT6Q5T7P8 510 aaPredicted RBP15.47■□□□□ 0.07
LIME1-201ENST00000309546 Q6ZPA2 131 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 NKAIN3Q8N8D7 197 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 TMEM104Q8NE00 496 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 FBLIM1Q8WUP2 373 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 VCXQ9H320 206 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 PLCXD1Q9NUJ7 323 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 AURKAIP1Q9NWT8 199 aaPredicted RBP15.47■□□□□ 0.07
LIME1-201ENST00000309546 GNG12Q9UBI6 72 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 LINC00527Q9UJ94 153 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 ERGIC3Q9Y282 383 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 PEX16Q9Y5Y5 336 aa15.47■□□□□ 0.07
LIME1-201ENST00000309546 NCBP2LA6PVI3 153 aaKnown RBP15.46■□□□□ 0.07
LIME1-201ENST00000309546 C12orf77C9JDV5 145 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 ANKRD65E5RJM6 399 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 SLC31A2O15432 143 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 SPINT2O43291 252 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 MAPK3P27361 379 aaPredicted RBP15.46■□□□□ 0.07
LIME1-201ENST00000309546 LOXL3P58215 753 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 C6orf183Q5T699 404 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 FOXB2Q5VYV0 432 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 SLC35E3Q7Z769 313 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 LINC00311Q8N616 119 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 NANOGP1Q8N7R0 232 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 OR10V1Q8NGI7 309 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 CHPT1Q8WUD6 406 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 THRSPQ92748 146 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 FAM46BQ96A09 425 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 RAB9BQ9NP90 201 aa15.46■□□□□ 0.07
LIME1-201ENST00000309546 DNAH3Q8TD57 4116 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 UBE2QL1A1L167 161 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 HBZP02008 142 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 CD1AP06126 327 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 SLC35A2P78381 396 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 INSL4Q14641 139 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 CDH26Q8IXH8 852 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 IZUMO1Q8IYV9 350 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 WFDC9Q8NEX5 89 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 OR1L1Q8NH94 360 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 TFAP2CQ92754 450 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 CYYR1Q96J86 154 aa15.45■□□□□ 0.06
LIME1-201ENST00000309546 EAF1Q96JC9 268 aaPredicted RBP15.45■□□□□ 0.06
LIME1-201ENST00000309546 GABPB1Q06547 395 aaPredicted RBP15.44■□□□□ 0.06
LIME1-201ENST00000309546 GPR50Q13585 617 aa15.44■□□□□ 0.06
LIME1-201ENST00000309546 FOXRED2Q8IWF2 684 aa15.44■□□□□ 0.06
LIME1-201ENST00000309546 C8orf31Q8N9H6 132 aa15.44■□□□□ 0.06
LIME1-201ENST00000309546 OR2T10Q8NGZ9 312 aa15.44■□□□□ 0.06
LIME1-201ENST00000309546 RTN4IP1Q8WWV3 396 aaPredicted RBP15.44■□□□□ 0.06
LIME1-201ENST00000309546 Q96M66 194 aa15.44■□□□□ 0.06
LIME1-201ENST00000309546 FKBP14Q9NWM8 211 aa15.44■□□□□ 0.06
LIME1-201ENST00000309546 FAM90A10PA6NDY2 464 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 FAM90A7PA6NKC0 464 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 NUDT19A8MXV4 375 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 FAM90A23PA8MXZ1 464 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 MPIG6BO95866 241 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 RCC1P18754 421 aaPredicted RBP15.43■□□□□ 0.06
LIME1-201ENST00000309546 FUT3P21217 361 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 SLC35B1P78383 322 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 EBI3Q14213 229 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 NKAPLQ5M9Q1 402 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 FAM27D1Q5T7N8 215 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 TRAT1Q6PIZ9 186 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 LYPD6Q86Y78 171 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 UQCC2Q9BRT2 126 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 TMED9Q9BVK6 235 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 MND1Q9BWT6 205 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 CST11Q9H112 138 aa15.43■□□□□ 0.06
LIME1-201ENST00000309546 PTGES3LE9PB15 166 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 PDCD6O75340 191 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 IGHG2P01859 326 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 CDK1P06493 297 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 RPL23AP62750 156 aaKnown RBP15.42■□□□□ 0.06
LIME1-201ENST00000309546 TMEM30BQ3MIR4 351 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 Q3ZCU0 254 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 ACSM3Q53FZ2 586 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 RBM48Q5RL73 367 aaKnown RBP15.42■□□□□ 0.06
LIME1-201ENST00000309546 SIGIRRQ6IA17 410 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 SLC25A48Q6ZT89 311 aaKnown RBP15.42■□□□□ 0.06
LIME1-201ENST00000309546 TGIF2LXQ8IUE1 241 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 STPG2Q8N412 459 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 ZNF439Q8NDP4 499 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 OR51D1Q8NGF3 324 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 ST6GALNAC6Q969X2 333 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 RBMXL1Q96E39 390 aaKnown RBP15.42■□□□□ 0.06
LIME1-201ENST00000309546 RCC1LQ96I51 464 aaKnown RBP15.42■□□□□ 0.06
LIME1-201ENST00000309546 TAF9BQ9HBM6 251 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 KCNIP1Q9NZI2 227 aa15.42■□□□□ 0.06
LIME1-201ENST00000309546 LINC01548A6NM66 108 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 ZNF736B4DX44 427 aaPredicted RBP15.41■□□□□ 0.06
LIME1-201ENST00000309546 CA11O75493 328 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 SC5DO75845 299 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 MOSP00540 346 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 CD1BP29016 333 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 ZNF134P52741 427 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 CT45A1Q5HYN5 189 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 C18orf65Q6ZTR6 163 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 OR2W3Q7Z3T1 314 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 GAPTQ8N292 157 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 Q8N6K4 173 aa15.41■□□□□ 0.06
LIME1-201ENST00000309546 Q8N9W7 124 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms