RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MYO16Q9Y6X6 1858 aa11.08□□□□□ -0.64
USP38-201ENST00000307017 KCNE1BA0A087WTH5 132 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 OR10J1P30954 320 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 EIF3IQ13347 325 aaKnown RBP11.07□□□□□ -0.64
USP38-201ENST00000307017 Q6ZNB5 142 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 NT5CQ8TCD5 201 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 BCL2L10Q9HD36 194 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 TRDCB7Z8K6 153 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 NDUFB4O95168 129 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 VAMP5O95183 116 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 RASL11BQ9BPW5 248 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 HDGFL3Q9Y3E1 203 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 EIF4E3Q8N5X7 224 aaKnown RBP11.07□□□□□ -0.64
USP38-201ENST00000307017 ADAMTS17Q8TE56 1095 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 SEC11CQ9BY50 192 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 LYRM2Q9NU23 88 aaPredicted RBP11.07□□□□□ -0.64
USP38-201ENST00000307017 TCFL5Q9UL49 500 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 IGHV4-34P06331 123 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 SIRT4Q9Y6E7 314 aaPredicted RBP11.07□□□□□ -0.64
USP38-201ENST00000307017 TRIP12Q14669 1992 aaPredicted RBP11.07□□□□□ -0.64
USP38-201ENST00000307017 CCL4P13236 92 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 MRPS11P82912 194 aaKnown RBP11.07□□□□□ -0.64
USP38-201ENST00000307017 SLC36A1Q7Z2H8 476 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 MAST2Q6P0Q8 1798 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 PKIAP61925 76 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 BHLHA15Q7RTS1 189 aaPredicted RBP11.07□□□□□ -0.64
USP38-201ENST00000307017 GBGT1Q8N5D6 347 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 RAB40CQ96S21 281 aa11.07□□□□□ -0.64
USP38-201ENST00000307017 SSC5DA1L4H1 1573 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 PATE3B3GLJ2 98 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 LGALS7P47929 136 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 FHITP49789 147 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 GPA33Q99795 319 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 NUDT16L1Q9BRJ7 211 aaKnown RBP11.06□□□□□ -0.64
USP38-201ENST00000307017 PGA4P0DJD7 388 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 PGA5P0DJD9 388 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 PLP1P60201 277 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 LHFPL4Q7Z7J7 247 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 GUCD1Q96NT3 240 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 TJP1Q07157 1748 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 SYNGR2O43760 224 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 IGLV3-25P01717 112 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 ZNF79Q15937 498 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 FAM162BQ5T6X4 162 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 WNT10AQ9GZT5 417 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 PLCH1Q4KWH8 1693 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 CORTO00230 105 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 MARVELD1Q9BSK0 173 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 SCN7AQ01118 1682 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 SNRNP200O75643 2136 aaKnown RBP11.06□□□□□ -0.64
USP38-201ENST00000307017 IGHV3OR16-8A0A075B7F1 116 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 PEAR1Q5VY43 1037 aaPredicted RBP11.06□□□□□ -0.64
USP38-201ENST00000307017 CALHM1Q8IU99 346 aa11.06□□□□□ -0.64
USP38-201ENST00000307017 PLA2G10O15496 165 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 NUBP1P53384 320 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 IL13RA2Q14627 380 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 TDHQ8IZJ6 230 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 OR52M1Q8NGK5 317 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 OR51B2Q9Y5P1 312 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 PDCD6O75340 191 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 FAM74A4Q5TZK3 123 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 CT55Q8WUE5 264 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 PARD6GQ9BYG4 376 aaPredicted RBP11.05□□□□□ -0.64
USP38-201ENST00000307017 TMEM191AQ9H0A3 160 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 ARRDC5A6NEK1 342 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 ATXN7O15265 892 aaPredicted RBP11.05□□□□□ -0.64
USP38-201ENST00000307017 ATP6V0CP27449 155 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 ZNF826PQ6ZT77 177 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 HARBI1Q96MB7 349 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 PRDM14Q9GZV8 571 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 KIAA0040Q15053 153 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 PP6455Q8WZ26 134 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 PLAC1Q9HBJ0 212 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 PDCD11Q14690 1871 aaKnown RBP11.05□□□□□ -0.64
USP38-201ENST00000307017 TRPM6Q9BX84 2022 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 OR2T8A6NH00 312 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 K7ERU9 68 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 CCL3P10147 92 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 IFITM3Q01628 133 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 LY6EQ16553 131 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 ACER2Q5QJU3 275 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 FAHD2BQ6P2I3 314 aaPredicted RBP11.05□□□□□ -0.64
USP38-201ENST00000307017 SLC35E3Q7Z769 313 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 WDFY1Q8IWB7 410 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 H0YL77 283 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 F2RL2O00254 374 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 ANKRD55Q3KP44 614 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 C18orf15Q96N68 181 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 CXXC4Q9H2H0 198 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 CES1P1Q9UKY3 287 aa11.05□□□□□ -0.64
USP38-201ENST00000307017 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
USP38-201ENST00000307017 C17orf51A8MQB3 221 aa11.04□□□□□ -0.64
USP38-201ENST00000307017 PGA3P0DJD8 388 aa11.04□□□□□ -0.64
USP38-201ENST00000307017 SLC25A40Q8TBP6 338 aa11.04□□□□□ -0.64
USP38-201ENST00000307017 DYNLRB2Q8TF09 96 aa11.04□□□□□ -0.64
USP38-201ENST00000307017 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms