RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 NFAM1Q8NET5 270 aaPredicted RBP7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SNRNP40Q96DI7 357 aaKnown RBP7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 DUSP21Q9H596 190 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 FXYD1O00168 92 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 COX6A1P12074 109 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 ISL1P61371 349 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 FAM27BQ5VT28 67 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 STAC2Q6ZMT1 411 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 SLC16A12Q6ZSM3 486 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM229BQ8NBD8 167 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 OR10J6PQ8NGY7 276 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 PIPOXQ9P0Z9 390 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 HS3ST3B1Q9Y662 390 aa7.31□□□□□ -1.24
PCDHB1-201ENST00000306549 DEFB108AA8MXU0 73 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 TRIM77I1YAP6 450 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 TSPAN2O60636 221 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 WISP3O95389 354 aaPredicted RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 GPANK1O95872 356 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 PPOXP50336 477 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 ECSCRQ19T08 205 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 FAHD2BQ6P2I3 314 aaPredicted RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM251Q8N6I4 163 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 FAHD2AQ96GK7 314 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 TUBA4BQ9H853 241 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 IL19Q9UHD0 177 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF106Q9H2Y7 1883 aaKnown RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 CBY3A6NI87 242 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 ATXN7O15265 892 aaPredicted RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 FAM210BQ96KR6 192 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 MOGAT1Q96PD6 335 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 PRR14Q9BWN1 585 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 PRNDQ9UKY0 176 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 PLPP2O43688 288 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 MPDU1O75352 247 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 EML2O95834 649 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 PEBP1P30086 187 aaKnown RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 CSF2RBP32927 897 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM183BQ1AE95 376 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 MPV17LQ2QL34 196 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 MOGAT2Q3SYC2 334 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 SPRED2Q7Z698 418 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 WFDC3Q8IUB2 231 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 BAP18Q8IXM2 172 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 OR1N2Q8NGR9 330 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 OR13F1Q8NGS4 319 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 PRDM6Q9NQX0 595 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 SLC2A9Q9NRM0 540 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 RASL12Q9NYN1 266 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 SMIM10L1P0DMW3 83 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 CDAP32320 146 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 SMIM10Q96HG1 83 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 OR2J1Q9GZK6 312 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 BET1LQ9NYM9 111 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF107Q9UII5 783 aaPredicted RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A1B0GTH9 108 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 HIST1H3AP68431 136 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 ETFDHQ16134 617 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 C11orf91Q3C1V1 193 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 TM4SF20Q53R12 229 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 C20orf196Q8IYI0 205 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 FLYWCH2Q96CP2 140 aaKnown RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 OR5M11Q96RB7 305 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 GPX7Q96SL4 187 aaPredicted RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 CBY1Q9Y3M2 126 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 IGLV3-12A0A075B6K2 115 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A1W2PRD5 423 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A1W2PRF3 423 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A1W2PRM7 423 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 KIAA1324LA8MWY0 1029 aaPredicted RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 B9A039 149 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 P01737 135 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 SPANXN1Q5VSR9 72 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 OR52M1Q8NGK5 317 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 ASCL3Q9NQ33 180 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 MANBALQ9NQG1 85 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 CHST2Q9Y4C5 530 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A1W2PNV4 684 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 COMPP49747 757 aaPredicted RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 SNRPNP63162 240 aaKnown RBP7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 GGTLC2Q14390 218 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 CLEC12BQ2HXU8 276 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 GATA6Q92908 595 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 METTL26Q96S19 204 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 PCGF1Q9BSM1 259 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 ZNF385DQ9H6B1 395 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 HSPB8Q9UJY1 196 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 LIPGQ9Y5X9 500 aa7.3□□□□□ -1.24
PCDHB1-201ENST00000306549 H3BP45 60 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 RHBDL1O75783 438 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 IGHA1P01876 353 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 CIRBPQ14011 172 aaKnown RBP7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 TIMM23BQ5SRD1 257 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 AMER3Q8N944 861 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 ZBTB34Q8NCN2 500 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 DOK5Q9P104 306 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 A0A1W2PQM1 296 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 TCRBV5S2A0A599 114 aa7.29□□□□□ -1.24
PCDHB1-201ENST00000306549 TMEM218A2RU14 115 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms