RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 TMEM235A6NFC5 223 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 HBZP02008 142 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 ARG1P05089 322 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 GSTP1P09211 210 aaKnown RBP18.2■□□□□ 0.5
HOXD4-201ENST00000306324 SAA4P35542 130 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF260Q3ZCT1 412 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF880Q6PDB4 577 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 C9orf139Q6ZV77 190 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 MOB1BQ7L9L4 216 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 C5orf24Q7Z6I8 188 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 ABHD12Q8N2K0 398 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 OR10A7Q8NGE5 316 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 OR1L1Q8NH94 360 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 CLEC7AQ9BXN2 247 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.2■□□□□ 0.5
HOXD4-201ENST00000306324 TRBV6-6A0A0A6YYG2 114 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 IGHV3-43A0A0B4J1X8 118 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 SMIM31A0A1B0GVY4 71 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 DPPA5A6NC42 116 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF701M0R085 212 aaPredicted RBP18.2■□□□□ 0.5
HOXD4-201ENST00000306324 SDCBPO00560 298 aaPredicted RBP18.2■□□□□ 0.5
HOXD4-201ENST00000306324 IGHV3-7P01780 117 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 APOA1P02647 267 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 IGHV3-43DP0DP04 118 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 TALDO1P37837 337 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 LGALS4P56470 323 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 HACD4Q5VWC8 232 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 LEAP2Q969E1 77 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 CMTM3Q96MX0 182 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF286AQ9HBT8 521 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 C2CD3Q4AC94 2353 aa18.2■□□□□ 0.5
HOXD4-201ENST00000306324 XRCC3O43542 346 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 GNG2P59768 71 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 MIDNQ504T8 468 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 TMEM69Q5SWH9 247 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 UTF1Q5T230 341 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF554Q86TJ5 538 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 OR11H6Q8NGC7 330 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 DCUN1D5Q9BTE7 237 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 Q9N2K0 584 aa18.19■□□□□ 0.5
HOXD4-201ENST00000306324 A0A0U1RQK1 487 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 MDFIC2A0A1B0GVS7 189 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 FAM25AB3EWG3 89 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 FAM25CB3EWG5 89 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 FAM25GB3EWG6 89 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 F2RL2O00254 374 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 RGS5O15539 181 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 FCGR3AP08637 254 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 ELK1P19419 428 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 HMGN3Q15651 99 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 DEFB112Q30KQ8 113 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF626Q68DY1 528 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 NUDCD2Q8WVJ2 157 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 NDUFA13Q9P0J0 144 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF230Q9UIE0 474 aaPredicted RBP18.18■□□□□ 0.5
HOXD4-201ENST00000306324 MGAT4AQ9UM21 535 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 FAM96BQ9Y3D0 163 aa18.18■□□□□ 0.5
HOXD4-201ENST00000306324 A0A087X0M5 115 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 A0A1B0GX30 115 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 ODF3BA8MYP8 253 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 TOR1AO14656 332 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 MNDAP41218 407 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 PNLIPRP3Q17RR3 467 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 OR52M1Q8NGK5 317 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 IL1F10Q8WWZ1 152 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 MAFIPQ8WZ33 124 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 GALMQ96C23 342 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF48Q96MX3 618 aaPredicted RBP18.17■□□□□ 0.5
HOXD4-201ENST00000306324 GNG12Q9UBI6 72 aa18.17■□□□□ 0.5
HOXD4-201ENST00000306324 POM121CA8CG34 1229 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 IFNA2P01563 188 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 CD34P28906 385 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 GNG10P50151 68 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 LOXL3P58215 753 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 HLA-DRB3P79483 266 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 PITPNAQ00169 270 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 FAM53AQ6NSI3 398 aaPredicted RBP18.16■□□□□ 0.5
HOXD4-201ENST00000306324 RBMS3Q6XE24 437 aaKnown RBP18.16■□□□□ 0.5
HOXD4-201ENST00000306324 SIGLECL1Q8N7X8 197 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 OR10V1Q8NGI7 309 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF418Q8TF45 676 aaPredicted RBP18.16■□□□□ 0.5
HOXD4-201ENST00000306324 ZDHHC16Q969W1 377 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 SLIRPQ9GZT3 109 aaKnown RBP18.16■□□□□ 0.5
HOXD4-201ENST00000306324 C6orf62Q9GZU0 229 aaPredicted RBP18.16■□□□□ 0.5
HOXD4-201ENST00000306324 AUNIPQ9H7T9 357 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 OR2S2Q9NQN1 319 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 GFOD1Q9NXC2 390 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 PSG11Q9UQ72 335 aa18.16■□□□□ 0.5
HOXD4-201ENST00000306324 CTDSP2O14595 271 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 PTHLHP12272 177 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 TAS2R20P59543 309 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 MADCAM1Q13477 382 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 LHFPL4Q7Z7J7 247 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 OR9G1Q8NH87 305 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 ZNF596Q8TC21 504 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 C17orf50Q8WW18 174 aa18.15■□□□□ 0.5
HOXD4-201ENST00000306324 DGCR14Q96DF8 476 aaKnown RBP18.15■□□□□ 0.5
HOXD4-201ENST00000306324 MRPS7Q9Y2R9 242 aaKnown RBP18.15■□□□□ 0.5
HOXD4-201ENST00000306324 FBP1P09467 338 aa18.14■□□□□ 0.5
HOXD4-201ENST00000306324 SCTP09683 121 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms