RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 OR2B8PP59922 312 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 MRPL30Q8TCC3 161 aaKnown RBP12.89□□□□□ -0.35
CSDC2-201ENST00000306149 NIT2Q9NQR4 276 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 B4GALT7Q9UBV7 327 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
CSDC2-201ENST00000306149 BDP1A6H8Y1 2624 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 TRAV24A0A0B4J272 114 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 WRBO00258 174 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 CLN5O75503 358 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 SLC34A2O95436 690 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 NQO2P16083 231 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 VDAC1P21796 283 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 EIF2S3P41091 472 aaKnown RBP12.89□□□□□ -0.35
CSDC2-201ENST00000306149 NRN1LQ496H8 165 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 IL22RA1Q8N6P7 574 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 IER2Q9BTL4 223 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 TAAR3PQ9P1P4 343 aa12.89□□□□□ -0.35
CSDC2-201ENST00000306149 UCP1P25874 307 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 CMTM1Q8IZ96 169 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 OR5A2Q8NGI9 324 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 OR5P3Q8WZ94 311 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 MUCL1Q96DR8 90 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 GNPNAT1Q96EK6 184 aaPredicted RBP12.88□□□□□ -0.35
CSDC2-201ENST00000306149 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 HIPK2Q9H2X6 1198 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
CSDC2-201ENST00000306149 OR1A1Q9P1Q5 309 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 A0A087WWC5 75 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 KIR2DS1A0A191URI9 304 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 A0A1W2PR80 420 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 KIR2DS4P43632 304 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 ID3Q02535 119 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 PLP2Q04941 152 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 KIR2DS1Q14954 304 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 MPV17LQ2QL34 196 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 SAXO1Q8IYX7 474 aa12.88□□□□□ -0.35
CSDC2-201ENST00000306149 CFAP47Q6ZTR5 3102 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 PPIHO43447 177 aaKnown RBP12.87□□□□□ -0.35
CSDC2-201ENST00000306149 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
CSDC2-201ENST00000306149 PSG2P11465 335 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 CEACAM1P13688 526 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 PAX9P55771 341 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 SPRY4Q9C004 299 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 STRADBQ9C0K7 418 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 LIPGQ9Y5X9 500 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 COL27A1Q8IZC6 1860 aaPredicted RBP12.87□□□□□ -0.35
CSDC2-201ENST00000306149 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 H3BQ15 152 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 DCAF10Q5QP82 559 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 MCEMP1Q8IX19 187 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 OR10J5Q8NHC4 309 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 IL22RA2Q969J5 263 aa12.87□□□□□ -0.35
CSDC2-201ENST00000306149 HSPB1P04792 205 aaKnown RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 F2RP25116 425 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 TMEM267Q0VDI3 215 aaPredicted RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 Q6ZRM9 215 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 FAM58AQ8N1B3 248 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 GPR146Q96CH1 333 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 RAB39BQ96DA2 213 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 GUCD1Q96NT3 240 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 TMPRSS5Q9H3S3 457 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 ARHGAP21Q5T5U3 1957 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 ZNF727A8MUV8 499 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 SS18L1O75177 396 aaPredicted RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 S100PP25815 95 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 ICAM4Q14773 271 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 OR8G1Q15617 311 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 ZNF324BQ6AW86 544 aaPredicted RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 OR5D13Q8NGL4 314 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 DLL3Q9NYJ7 618 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 PPP1R3CQ9UQK1 317 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 RNF115Q9Y4L5 304 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 H0Y980 276 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 SCAF4O95104 1147 aaKnown RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 SELEP16581 610 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 ZNF16P17020 682 aaPredicted RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 ARR3P36575 388 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 RBMXL1Q96E39 390 aaKnown RBP12.86□□□□□ -0.35
CSDC2-201ENST00000306149 OR2W1Q9Y3N9 320 aa12.86□□□□□ -0.35
CSDC2-201ENST00000306149 SPENQ96T58 3664 aaKnown RBP12.85□□□□□ -0.35
CSDC2-201ENST00000306149 SIRPB1O00241 398 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 TXNL1O43396 289 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 IL18BPO95998 194 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 MT-CO3P00414 261 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 SERPINE2P07093 398 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 APLNRP35414 380 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 CLN3Q13286 438 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 ATP5SQ99766 215 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 USF3Q68DE3 2245 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 H0YL77 283 aa12.85□□□□□ -0.35
CSDC2-201ENST00000306149 HBE1P02100 147 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms