RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 TMEM31Q5JXX7 168 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 FADS6Q8N9I5 356 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 PCGF1Q9BSM1 259 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 PLK3Q9H4B4 646 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 IGLV3-12A0A075B6K2 115 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 SYNGR3O43761 229 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 TUBG1P23258 451 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 SAXO1Q8IYX7 474 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 RPP25Q9BUL9 199 aaKnown RBP11.86□□□□□ -0.51
KARS-201ENST00000302445 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
KARS-201ENST00000302445 METTL7AQ9H8H3 244 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 SLC39A9Q9NUM3 307 aa11.86□□□□□ -0.51
KARS-201ENST00000302445 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
KARS-201ENST00000302445 A0A1W2PPC4 97 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 SYNGR2O43760 224 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 HNRNPKP61978 463 aaKnown RBP eCLIP11.85□□□□□ -0.51
KARS-201ENST00000302445 TRIM61Q5EBN2 209 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 ANKRD37Q7Z713 158 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 KMT5CQ86Y97 462 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 PRSS58Q8IYP2 241 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 MRPL30Q8TCC3 161 aaKnown RBP11.85□□□□□ -0.51
KARS-201ENST00000302445 EXTL1Q92935 676 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 NAT6Q93015 286 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 LHX4Q969G2 390 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 PARLQ9H300 379 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 VSIRQ9H7M9 311 aa11.85□□□□□ -0.51
KARS-201ENST00000302445 MRPS18CQ9Y3D5 142 aaKnown RBP11.85□□□□□ -0.51
KARS-201ENST00000302445 ADAMTS20P59510 1910 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 CTXND1A0A1B0GTU2 59 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 LRRC3CA6NJW4 275 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 FAM90A26D6RGX4 464 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 TOX3O15405 576 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 SCGB1D1O95968 90 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 FGF8P55075 233 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 RPL15P61313 204 aaKnown RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 DLX2Q07687 328 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 TMEM267Q0VDI3 215 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 C16orf47Q6ZP98 133 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 ZCCHC14Q8WYQ9 949 aaKnown RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 GPR146Q96CH1 333 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 PCED1AQ9H1Q7 454 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 ATP23Q9Y6H3 246 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 ZNF816-ZNF321PA0A0X1KG74 233 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 hCG_38984A0A1B0GV85 526 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 LNP1A1A4G5 178 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 TNFSF13O75888 250 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 OR7C1O76099 320 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 EPHA8P29322 1005 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 ELLP55199 621 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 RPS18P62269 152 aaKnown RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 PAFAH1B2P68402 229 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 DAZAP2Q15038 168 aaPredicted RBP11.84□□□□□ -0.51
KARS-201ENST00000302445 ANKRD39Q53RE8 183 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 PHYHD1Q5SRE7 291 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
KARS-201ENST00000302445 MIEN1Q9BRT3 115 aa11.84□□□□□ -0.51
KARS-201ENST00000302445 SHANK1Q9Y566 2161 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 TNRC6BQ9UPQ9 1833 aaKnown RBP11.83□□□□□ -0.52
KARS-201ENST00000302445 FER1L5A0AVI2 2057 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 TRBV6-6A0A0A6YYG2 114 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 IGKV1D-13A0A0B4J2D9 117 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 OR6C6A6NF89 314 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 IGKV1-13P0DP09 117 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 ESDP10768 282 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 FOXL1Q12952 345 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 TEX43Q6ZNM6 134 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 C17orf78Q8N4C9 275 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 NECAP1Q8NC96 275 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 OR2AE1Q8NHA4 323 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 ULBP2Q9BZM5 246 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 PXMP4Q9Y6I8 212 aa11.83□□□□□ -0.52
KARS-201ENST00000302445 TRBV11-1A0A0K0K1C0 115 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 NPIPA2E9PIF3 369 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 NPIPA3F8WFD2 350 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 TMPRSS2O15393 492 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 MLNRO43193 412 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 HPRT1P00492 218 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 GYPAP02724 150 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 SERPINE2P07093 398 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 GNB2P62879 340 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 ATP6V1FQ16864 119 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 LINC00596Q86U02 117 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 PLXDC1Q8IUK5 500 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 OR10J5Q8NHC4 309 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 WDYHV1Q96HA8 205 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 MS4A10Q96PG2 267 aa11.82□□□□□ -0.52
KARS-201ENST00000302445 RBM24Q9BX46 236 aaKnown RBP11.82□□□□□ -0.52
KARS-201ENST00000302445 PCDH15Q96QU1 1955 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms