RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PRR19A6NJB7 356 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 SLC22A20A6NK97 555 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 ENSAO43768 121 aaKnown RBP11.49□□□□□ -0.57
CASC4-201ENST00000299957 TFF1P04155 84 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 NDUFB7P17568 137 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 RAB31Q13636 194 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 PMS2P11Q13670 270 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 IL22RA2Q969J5 263 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 GALMQ96C23 342 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 FAM117AQ9C073 453 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 DOK5Q9P104 306 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 OR1A1Q9P1Q5 309 aa11.49□□□□□ -0.57
CASC4-201ENST00000299957 PLXNB3Q9ULL4 1909 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 SHISA7A6NL88 538 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 M0R1X1 148 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 OR7C2O60412 319 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 OR8U8P0C7N1 319 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 PRF1P14222 555 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 GPR12P47775 334 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 RPL19P84098 196 aaKnown RBP11.48□□□□□ -0.57
CASC4-201ENST00000299957 ZNF90Q03938 601 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 PRR27Q6MZM9 219 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 FGFBP3Q8TAT2 258 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 OR2J1Q9GZK6 312 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 PCDH15Q96QU1 1955 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 XKRY2A2RUG3 117 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 OR5H1A6NKK0 313 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 SLC35B1P78383 322 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 ATP1A1-AS1Q5TC04 95 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 H1FXQ92522 213 aaKnown RBP11.48□□□□□ -0.57
CASC4-201ENST00000299957 IGSF23A1L1A6 192 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 LRP5LA4QPB2 252 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 TRDCB7Z8K6 153 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 SPINT2O43291 252 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 DEFA4P12838 97 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 FOXG1P55316 489 aaPredicted RBP11.48□□□□□ -0.57
CASC4-201ENST00000299957 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 KCNE4Q8WWG9 221 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 ABHD14BQ96IU4 210 aa11.48□□□□□ -0.57
CASC4-201ENST00000299957 SPRY3O43610 288 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
CASC4-201ENST00000299957 GNG10P50151 68 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 SUCLG1P53597 346 aaKnown RBP11.47□□□□□ -0.57
CASC4-201ENST00000299957 TCL1AP56279 114 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 FAM3AP98173 230 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 FAM78BQ5VT40 261 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 FAM166AQ6J272 317 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 MRPL13Q9BYD1 178 aaKnown RBP11.47□□□□□ -0.57
CASC4-201ENST00000299957 ZNF552Q9H707 407 aaPredicted RBP11.47□□□□□ -0.57
CASC4-201ENST00000299957 UCK1Q9HA47 277 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
CASC4-201ENST00000299957 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 TANC1Q9C0D5 1861 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 TRAV34A0A0B4J273 112 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 RNF212BA8MTL3 300 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 PAGE4O60829 102 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 IRF2P14316 349 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 FAM3BP58499 235 aaPredicted RBP11.47□□□□□ -0.57
CASC4-201ENST00000299957 IL11RAQ14626 422 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 OR2Z1Q8NG97 314 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 A0A1B0GTQ1 180 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 TMEM187Q14656 261 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 ACSM6Q6P461 480 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 OR10G9Q8NGN4 311 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 OR10G7Q8NGN6 311 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 HIPK2Q9H2X6 1198 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 ZNF391Q9UJN7 358 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
CASC4-201ENST00000299957 CHCHD2Q9Y6H1 151 aaPredicted RBP11.47□□□□□ -0.57
CASC4-201ENST00000299957 CXorf65A6NEN9 183 aa11.46□□□□□ -0.57
CASC4-201ENST00000299957 ACAA1P09110 424 aaPredicted RBP11.46□□□□□ -0.57
CASC4-201ENST00000299957 COX5AP20674 150 aa11.46□□□□□ -0.57
CASC4-201ENST00000299957 ACTR3CQ9C0K3 210 aaPredicted RBP11.46□□□□□ -0.57
CASC4-201ENST00000299957 ANOS1P23352 680 aa11.46□□□□□ -0.57
CASC4-201ENST00000299957 GALR1P47211 349 aa11.46□□□□□ -0.57
CASC4-201ENST00000299957 TMEM241Q24JQ0 296 aa11.46□□□□□ -0.57
CASC4-201ENST00000299957 DHRS7BQ6IAN0 325 aaPredicted RBP11.46□□□□□ -0.57
CASC4-201ENST00000299957 ST8SIA5O15466 376 aa11.46□□□□□ -0.58
CASC4-201ENST00000299957 PPP1R35Q8TAP8 253 aa11.46□□□□□ -0.58
CASC4-201ENST00000299957 ZDHHC11Q9H8X9 412 aa11.46□□□□□ -0.58
CASC4-201ENST00000299957 WFDC1Q9HC57 220 aa11.46□□□□□ -0.58
CASC4-201ENST00000299957 CYTL1Q9NRR1 136 aa11.46□□□□□ -0.58
CASC4-201ENST00000299957 A0A087X0M5 115 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 A0A1B0GX30 115 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 A8MXE2 369 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 RHBDL1O75783 438 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 APELAP0DMC3 54 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 ARR3P36575 388 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 PMELP40967 661 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 PACRGQ96M98 296 aaPredicted RBP11.45□□□□□ -0.58
CASC4-201ENST00000299957 ATP5SQ99766 215 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 TMEM222Q9H0R3 208 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 WNT5BQ9H1J7 359 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 RPRMQ9NS64 109 aa11.45□□□□□ -0.58
CASC4-201ENST00000299957 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms