RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ZNF488Q96MN9 340 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 C19orf12Q9NSK7 152 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 LRFN1Q9P244 771 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 DTYMKP23919 212 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 B3GALT5-AS1P59052 145 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 HNF4GQ14541 408 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 C3AR1Q16581 482 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 TEX38Q6PEX7 206 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 LINC00696Q6ZRV3 163 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 IL1F10Q8WWZ1 152 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 TMEM37Q8WXS4 190 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 RDH5Q92781 318 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 SF3B5Q9BWJ5 86 aaKnown RBP11.56□□□□□ -0.56
CTDP1-202ENST00000299543 PLA2G3Q9NZ20 509 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 TCFL5Q9UL49 500 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 PPIAL4AQ9Y536 164 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 LIPGQ9Y5X9 500 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 NBEAQ8NFP9 2946 aa11.56□□□□□ -0.56
CTDP1-202ENST00000299543 DOCK10Q96BY6 2186 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 TRAV39A0A0B4J263 110 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 C3orf85A0A1B0GTC6 90 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 hCG_38984A0A1B0GV85 526 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 H3BP45 60 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 RBM11P57052 281 aaKnown RBP11.55□□□□□ -0.56
CTDP1-202ENST00000299543 PCBD1P61457 104 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 FOXL2NBQ6ZUU3 175 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 MRPL21Q7Z2W9 205 aaKnown RBP11.55□□□□□ -0.56
CTDP1-202ENST00000299543 COMMD1Q8N668 190 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 CCDC71LQ8N9Z2 235 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 CRIM1Q9NZV1 1036 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 GPR137BO60478 399 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 TK1P04183 234 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 TSPAN7P41732 249 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 PRSS8Q16651 343 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 CXorf66Q5JRM2 361 aaPredicted RBP11.55□□□□□ -0.56
CTDP1-202ENST00000299543 ZNF429Q86V71 674 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 NIPSNAP3BQ9BS92 247 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 GPR87Q9BY21 358 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 ARHGAP21Q5T5U3 1957 aa11.55□□□□□ -0.56
CTDP1-202ENST00000299543 CBY3A6NI87 242 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 MPPED1O15442 326 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 LAMTOR5O43504 91 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 AMBPP02760 352 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 SELEP16581 610 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 CD33P20138 364 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 NKX2-1P43699 371 aaPredicted RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 TDGF1P3P51864 188 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 DCAF12Q5T6F0 453 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 PPP1R32Q7Z5V6 425 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 TBC1D26Q86UD7 250 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 TUSC5Q8IXB3 177 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 OR2G3Q8NGZ4 309 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 MSI2Q96DH6 328 aaKnown RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 ADAMTS20P59510 1910 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 PRR14LQ5THK1 2151 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 MED13Q9UHV7 2174 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 ZNF732B4DXR9 585 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 NGFP01138 241 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 PAX1P15863 534 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 DUSP3P51452 185 aaPredicted RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 RAB1AP62820 205 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 MRPS11P82912 194 aaKnown RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 PMS2P11Q13670 270 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 ARSJQ5FYB0 599 aaPredicted RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 WDR25Q64LD2 544 aaPredicted RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 SLC25A24Q6NUK1 477 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 Q6ZPA2 131 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 GAPTQ8N292 157 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 OR51H1Q8NH63 302 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 KCNE4Q8WWG9 221 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 EP300Q09472 2414 aaPredicted RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 ADAM20O43506 726 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 GAPDHP04406 335 aaKnown RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 RAB11AP62491 216 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 PRDX4Q13162 271 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 IZUMO4Q1ZYL8 232 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
CTDP1-202ENST00000299543 HIST1H2AAQ96QV6 131 aa11.54□□□□□ -0.56
CTDP1-202ENST00000299543 LRRC3CA6NJW4 275 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 SPATA46Q5T0L3 261 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
CTDP1-202ENST00000299543 RPL36A-HNRNPH2H7BZ11 118 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 ZNF16P17020 682 aaPredicted RBP11.53□□□□□ -0.56
CTDP1-202ENST00000299543 P2RY1P47900 373 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 CST9LP1Q5W188 147 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 OR2C3Q8N628 320 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 CABLES2Q9BTV7 478 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 C12orf49Q9H741 205 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 CCL28Q9NRJ3 127 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 AQP7O14520 342 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 HSPA12AO43301 675 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 DFFBO76075 338 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 EWSR1Q01844 656 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTDP1-202ENST00000299543 TMEM105Q8N8V8 129 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 RNASE8Q8TDE3 154 aaKnown RBP11.53□□□□□ -0.56
CTDP1-202ENST00000299543 CT55Q8WUE5 264 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms