RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 Q8N7P7 452 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 OR52L2PQ8NGH6 319 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 SNAPC3Q92966 411 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 MRPS24Q96EL2 167 aaKnown RBP5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 WDFY2Q96P53 400 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 TBX15Q96SF7 602 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 SDHCQ99643 169 aaPredicted RBP5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 IFT22Q9H7X7 185 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 C12orf4Q9NQ89 552 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 HIF1ANQ9NWT6 349 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 CALYQ9NYX4 217 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 GLS2Q9UI32 602 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 EDARQ9UNE0 448 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 A3GALT2U3KPV4 340 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 MTORP42345 2549 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 MALRD1Q5VYJ5 2156 aa5.32□□□□□ -1.56
DEPDC4-201ENST00000299185 TRAV40A0A0B4J280 105 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PPIAL4CA0A0B4J2A2 164 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 MDFIC2A0A1B0GVS7 189 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 METTL21EPA6NDL7 271 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 C15orf65H3BRN8 121 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 M0QYG6 137 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 RGS13O14921 159 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 XRCC3O43542 346 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 ENSAO43768 121 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 LY6G6DO95868 133 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 TGFAP01135 160 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 HBZP02008 142 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 CSN2P05814 226 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 SCTP09683 121 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PPIAL4GP0DN37 164 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PI3P19957 117 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 NFYBP25208 207 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 CD40LGP29965 261 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PPP1CCP36873 323 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 SCAND1P57086 179 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 DYNC1I2Q13409 638 aaKnown RBP5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 LSAMPQ13449 338 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 HMGN3Q15651 99 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 KCNJ8Q15842 424 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PYDC2Q56P42 97 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 IGSF11Q5DX21 431 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 HCP5Q6MZN7 132 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 SPNS3Q6ZMD2 512 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 VMO1Q7Z5L0 202 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 C17orf50Q8WW18 174 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 RAB40AQ8WXH6 277 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 TRIM63Q969Q1 353 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PTX4Q96A99 478 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PHF21AQ96BD5 680 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 C5orf30Q96GV9 206 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 MED30Q96HR3 178 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 TSC22D3Q99576 134 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PCGF1Q9BSM1 259 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 ST6GALNAC5Q9BVH7 336 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 SRRQ9GZT4 340 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 FAM234AQ9H0X4 552 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 SIRPDQ9H106 197 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 DNTTIP1Q9H147 329 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 MMP27Q9H306 513 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF286AQ9HBT8 521 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 Q9N2K0 584 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 DIABLOQ9NR28 239 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 YAE1D1Q9NRH1 226 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 PCDHB16Q9NRJ7 776 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 OPN4Q9UHM6 478 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 TRAPPC2LQ9UL33 140 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 INSIG2Q9Y5U4 225 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 APCP25054 2843 aa5.31□□□□□ -1.56
DEPDC4-201ENST00000299185 TRGV10A0A0A0MS01 117 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 SDCBPO00560 298 aaPredicted RBP5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 FABP7O15540 132 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 NDUFA2O43678 99 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 TMEM127O75204 238 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 FOXH1O75593 365 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 FSTL3O95633 263 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 PMP2P02689 132 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 GSTT2P0CG29 244 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 GSTT2BP0CG30 244 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 IGHV4-38-2P0DP08 117 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 HLA-DMAP28067 261 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 S100A5P33763 92 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 TALDO1P37837 337 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 MNDAP41218 407 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 DVL1P1P54792 670 aaPredicted RBP5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 BAK1Q16611 211 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 CR1LQ2VPA4 569 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 PLA1AQ53H76 456 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 LDLRAD2Q5SZI1 272 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 HACD4Q5VWC8 232 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 SLC35E4Q6ICL7 350 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 ZNF880Q6PDB4 577 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 GLCCI1Q86VQ1 547 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 LDLRAD3Q86YD5 345 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 GAPTQ8N292 157 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 C11orf42Q8N5U0 333 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 LINC01356Q8N9X3 169 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 LY6G5BQ8NDX9 201 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 OR4D10Q8NGI6 311 aa5.3□□□□□ -1.56
DEPDC4-201ENST00000299185 C8orf46Q8TAG6 207 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms