RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 NAGKQ9UJ70 344 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 SCN3AQ9NY46 2000 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 ISG15P05161 165 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 RPL24P83731 157 aaKnown RBP12.38□□□□□ -0.43
COL1A2-201ENST00000297268 Q56UQ5 140 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 TUSC5Q8IXB3 177 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 D2HGDHQ8N465 521 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 BRWD1Q9NSI6 2320 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 COL5A1-AS1Q5SY13 56 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 OR1P1Q8NH06 330 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 TMEM204Q9BSN7 226 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 TUBD1Q9UJT1 453 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 YBX2Q9Y2T7 364 aaKnown RBP12.38□□□□□ -0.43
COL1A2-201ENST00000297268 TRPM6Q9BX84 2022 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 GCGP01275 180 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
COL1A2-201ENST00000297268 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 GPR61Q9BZJ8 451 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 IGLV1-36A0A0B4J1U3 117 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 PPP1CCP36873 323 aaKnown RBP12.37□□□□□ -0.43
COL1A2-201ENST00000297268 SRP14P37108 136 aaKnown RBP12.37□□□□□ -0.43
COL1A2-201ENST00000297268 CDX1P47902 265 aaPredicted RBP12.37□□□□□ -0.43
COL1A2-201ENST00000297268 ABLIM2Q6H8Q1 611 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 ZNF385AQ96PM9 386 aaKnown RBP12.37□□□□□ -0.43
COL1A2-201ENST00000297268 ZNF665Q9H7R5 613 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 MYOZ1Q9NP98 299 aaPredicted RBP12.37□□□□□ -0.43
COL1A2-201ENST00000297268 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 DMRT1Q9Y5R6 373 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 LOC102724200A0A096LPH7 203 aaPredicted RBP12.37□□□□□ -0.43
COL1A2-201ENST00000297268 J3QT63 122 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 MOSPD3O75425 235 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 LYZP61626 148 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 SFTPA2Q8IWL1 248 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 PCGF1Q9BSM1 259 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 TMEM222Q9H0R3 208 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 PTPRZ1P23471 2315 aaPredicted RBP12.37□□□□□ -0.43
COL1A2-201ENST00000297268 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 CRYBA2P53672 197 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 OR5A2Q8NGI9 324 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 RNF24Q9Y225 148 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 A0A0U1RQV5 110 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 PQLC2LA1A4F0 135 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 P01737 135 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 CCL3P10147 92 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 SPINK14Q6IE38 97 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 DEFB123Q8N688 67 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 TMEM251Q8N6I4 163 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 GAL3ST2Q9H3Q3 398 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
COL1A2-201ENST00000297268 CD8AP01732 235 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 SSPNQ14714 243 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 ZBTB34Q8NCN2 500 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 CD74P04233 296 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 LINC00596Q86U02 117 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 HSPB9Q9BQS6 159 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 SH3BGRL3Q9H299 93 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 SEBOXQ9HB31 216 aaPredicted RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 SLC2A8Q9NY64 477 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 A8MXK9 166 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 KIR2DL1P43626 348 aaPredicted RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 RND3P61587 244 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 MESP2Q0VG99 397 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 GAB4Q2WGN9 574 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 PET117Q6UWS5 81 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 ABHD3Q8WU67 409 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 LRRC3BQ96PB8 259 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 PILRAQ9UKJ1 303 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 BRS3P32247 399 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 MEF2BQ02080 365 aaPredicted RBP12.36□□□□□ -0.43
COL1A2-201ENST00000297268 TINAGQ9UJW2 476 aa12.36□□□□□ -0.43
COL1A2-201ENST00000297268 CXorf65A6NEN9 183 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 HFEQ30201 348 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 LINC01590Q5TEZ4 76 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 TEPPQ6URK8 271 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 OR52M1Q8NGK5 317 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 SHANK3Q9BYB0 1731 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 CIDEAO60543 219 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 DANCRP0C864 163 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 MPLP40238 635 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 TNFAIP6P98066 277 aaPredicted RBP12.35□□□□□ -0.43
COL1A2-201ENST00000297268 WDFY1Q8IWB7 410 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 ZNF488Q96MN9 340 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 GGACTQ9BVM4 153 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 H0Y980 276 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 GREM1O60565 184 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 SMPD2O60906 423 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 EPHA8P29322 1005 aaPredicted RBP12.35□□□□□ -0.43
COL1A2-201ENST00000297268 PLPPR5Q32ZL2 321 aa12.35□□□□□ -0.43
COL1A2-201ENST00000297268 WDR25Q64LD2 544 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms