RNA–Protein interactions for RNA: ENST00000296658.3

CMBL-201, Transcript of carboxymethylenebutenolidase homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMBL, Length 2,335 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-201ENST00000296658 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 ACSF3Q4G176 576 aaPredicted RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 FAM185AQ8N0U4 392 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 GAPTQ8N292 157 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 TMEM252Q8N6L7 170 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 OR2G3Q8NGZ4 309 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 YPEL4Q96NS1 127 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 TECTBQ96PL2 329 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 SEBOXQ9HB31 216 aaPredicted RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 IL36RNQ9UBH0 155 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 UBE2J1Q9Y385 318 aaPredicted RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 C5orf49A4QMS7 147 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 SSSCA1O60232 199 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 ZNF14P17017 642 aaPredicted RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 SRPXP78539 464 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 NRN1LQ496H8 165 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 ADAM5Q6NVV9 412 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 ZNF695Q8IW36 515 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 SLAMF9Q96A28 289 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 PAPOLGQ9BWT3 736 aaKnown RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 Q9N2K0 584 aa12.55□□□□□ -0.4
CMBL-201ENST00000296658 LYRM2Q9NU23 88 aaPredicted RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
CMBL-201ENST00000296658 ADAM20O43506 726 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 PITX3O75364 302 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 SMIM6P0DI80 62 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 OR2B8PP59922 312 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 ZNF266Q14584 549 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 GUSBP1Q15486 140 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 NMSQ5H8A3 153 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 SPIN3Q5JUX0 258 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 CISD2Q8N5K1 135 aaKnown RBP12.54□□□□□ -0.4
CMBL-201ENST00000296658 PLPPR1Q8TBJ4 325 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 MALSU1Q96EH3 234 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 IGKV1-6A0A0C4DH72 117 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 WDR1O75083 606 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 S100A8P05109 93 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 OR8U8P0C7N1 319 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 EPHA1P21709 976 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 TDGF1P3P51864 188 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 RND3P61587 244 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 RPS23P62266 143 aaKnown RBP12.54□□□□□ -0.4
CMBL-201ENST00000296658 SOHLH1Q5JUK2 328 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 OR5C1Q8NGR4 320 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 POM121Q96HA1 1249 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
CMBL-201ENST00000296658 PUS1Q9Y606 427 aaKnown RBP eCLIP12.54□□□□□ -0.4
CMBL-201ENST00000296658 CACNA1AO00555 2505 aa12.54□□□□□ -0.4
CMBL-201ENST00000296658 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 CST7O76096 145 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 TK1P04183 234 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 MAS1LP35410 378 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 ID3Q02535 119 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 MTCH1Q9NZJ7 389 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 ANKRD11Q6UB99 2663 aaPredicted RBP12.53□□□□□ -0.4
CMBL-201ENST00000296658 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A10PA6NDY2 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A18PA6NE21 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A16PA6NEW6 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A20PA6NIJ5 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A8PA6NJQ4 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A7PA6NKC0 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A22PA8MWA6 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A12PA8MX19 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A5PA8MXJ8 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A23PA8MXZ1 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 TUSC2O75896 110 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 NGFP01138 241 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A15PP0C7V4 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A13PP0C7W8 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A14PP0C7W9 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM90A24PP0C7X0 464 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 HAAOP46952 286 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 GPM6AP51674 278 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 PRDX4Q13162 271 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 SRSF7Q16629 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMBL-201ENST00000296658 HAGHQ16775 308 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM214BQ7L5A3 538 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 ZNF565Q8N9K5 539 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 SUMF2Q8NBJ7 301 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 FAM57AQ8TBR7 257 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 C12orf49Q9H741 205 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 PRSS50Q9UI38 385 aa12.53□□□□□ -0.4
CMBL-201ENST00000296658 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.41
CMBL-201ENST00000296658 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.41
CMBL-201ENST00000296658 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.41
CMBL-201ENST00000296658 NQO2P16083 231 aa12.52□□□□□ -0.41
CMBL-201ENST00000296658 DYNLT3P51808 116 aa12.52□□□□□ -0.41
CMBL-201ENST00000296658 FGF12P61328 243 aa12.52□□□□□ -0.41
CMBL-201ENST00000296658 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
CMBL-201ENST00000296658 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.41
CMBL-201ENST00000296658 MBD3L2Q8NHZ7 208 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms