RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 C21orf62-AS1Q17RA5 79 aa13.09□□□□□ -0.31
LSM6-201ENST00000296581 SMIM21Q3B7S5 101 aa13.09□□□□□ -0.31
LSM6-201ENST00000296581 SPRNQ5BIV9 151 aa13.09□□□□□ -0.31
LSM6-201ENST00000296581 ADAM5Q6NVV9 412 aa13.09□□□□□ -0.31
LSM6-201ENST00000296581 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
LSM6-201ENST00000296581 TCEAL7Q9BRU2 100 aa13.09□□□□□ -0.31
LSM6-201ENST00000296581 RTBDNQ9BSG5 229 aaPredicted RBP13.09□□□□□ -0.31
LSM6-201ENST00000296581 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
LSM6-201ENST00000296581 KIR2DS1A0A191URI9 304 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 C9orf170A2RU37 121 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 TRDCB7Z8K6 153 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 HLA-AP01891 365 aaKnown RBP13.08□□□□□ -0.32
LSM6-201ENST00000296581 ADH4P08319 380 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 OR4A8P0C604 315 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 KIR2DS4P43632 304 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 KIR2DS1Q14954 304 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 C9orf152Q5JTZ5 239 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 GSG1LQ6UXU4 331 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 C20orf204Q6ZNR8 217 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 SVBPQ8N300 66 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 PLPPR1Q8TBJ4 325 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 CA5BP1Q8WTZ4 195 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 TMEM230Q96A57 120 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 IL19Q9UHD0 177 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 H7C1Q1 480 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 IFNL4K9M1U5 179 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 GRNP28799 593 aaKnown RBP13.08□□□□□ -0.32
LSM6-201ENST00000296581 HOXA4Q00056 320 aaPredicted RBP13.08□□□□□ -0.32
LSM6-201ENST00000296581 TMEM128Q5BJH2 165 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 ZNF497Q6ZNH5 498 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 FAM90A1Q86YD7 464 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 RXFP4Q8TDU9 374 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 PLPPR2Q96GM1 343 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 PFDN5Q99471 154 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 KCNJ16Q9NPI9 418 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 TAS2R3Q9NYW6 316 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 OR14J1Q9UGF5 321 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 DMRT1Q9Y5R6 373 aa13.08□□□□□ -0.32
LSM6-201ENST00000296581 MEX3AA1L020 520 aaKnown RBP13.07□□□□□ -0.32
LSM6-201ENST00000296581 C5orf52A6NGY3 159 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
LSM6-201ENST00000296581 OR2A4O95047 310 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 AKR1C4P17516 323 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 EGR1P18146 543 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 CEBPDP49716 269 aaPredicted RBP13.07□□□□□ -0.32
LSM6-201ENST00000296581 TNFAIP6P98066 277 aaPredicted RBP13.07□□□□□ -0.32
LSM6-201ENST00000296581 DEFA6Q01524 100 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 RNF212Q495C1 297 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 MOGAT3Q86VF5 341 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 GCSAMQ8N6F7 178 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 LINC01560Q8TB33 94 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 SLC25A32Q9H2D1 315 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 NBASA2RRP1 2371 aa13.07□□□□□ -0.32
LSM6-201ENST00000296581 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.06□□□□□ -0.32
LSM6-201ENST00000296581 VSTM5A8MXK1 200 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 LHBP01229 141 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 GIPP09681 153 aaPredicted RBP13.06□□□□□ -0.32
LSM6-201ENST00000296581 SCTP09683 121 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 MUC1P15941 1255 aaPredicted RBP13.06□□□□□ -0.32
LSM6-201ENST00000296581 TNFSF4P23510 183 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 FCGR2CP31995 323 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 GLP1RP43220 463 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 SEC61A1P61619 476 aaKnown RBP13.06□□□□□ -0.32
LSM6-201ENST00000296581 IL13RA1P78552 427 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 C2orf68Q2NKX9 166 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 MOB1BQ7L9L4 216 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 MITD1Q8WV92 249 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 DIRC2Q96SL1 478 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 ICE1Q9Y2F5 2266 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 PSPNO60542 156 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 CTSDP07339 412 aaPredicted RBP13.06□□□□□ -0.32
LSM6-201ENST00000296581 CD55P08174 381 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 RD3LP0DJH9 198 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 HABP2Q14520 560 aaPredicted RBP13.06□□□□□ -0.32
LSM6-201ENST00000296581 GUCA2BQ16661 112 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 SPAG16Q8N0X2 631 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 ERGIC1Q969X5 290 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 BARX1Q9HBU1 254 aaPredicted RBP13.06□□□□□ -0.32
LSM6-201ENST00000296581 ZFP57Q9NU63 452 aa13.06□□□□□ -0.32
LSM6-201ENST00000296581 RFPL4AA6NLU0 287 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 E7EQL1 145 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 RFPL4AL1F8VTS6 287 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 ARPC5O15511 151 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 DUS4LO95620 317 aaKnown RBP13.05□□□□□ -0.32
LSM6-201ENST00000296581 CD3EP07766 207 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 CTXN2P0C2S0 81 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 PGAM2P15259 253 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 PI3P19957 117 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 CD34P28906 385 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 RAB5BP61020 215 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 RAP2BP61225 183 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 HLA-DRB3P79483 266 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 TFF3Q07654 80 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 HERPUD1Q15011 391 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 MOB3AQ96BX8 217 aa13.05□□□□□ -0.32
LSM6-201ENST00000296581 C14orf166Q9Y224 244 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms