RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 UBALD2Q8IYN6 164 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 ZPLD1Q8TCW7 415 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 GABRG3Q99928 467 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 TINAGQ9UJW2 476 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 CD74P04233 296 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 CRHP06850 196 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 HIST1H4GQ99525 98 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 ZFP30Q9Y2G7 519 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 TRAV8-7A0A075B6U6 113 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 TFPI2P48307 235 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 GCSAMLQ5JQS6 135 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 GBGT1Q8N5D6 347 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 RTN4RQ9BZR6 473 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 RABAC1Q9UI14 185 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 CT55Q8WUE5 264 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 MMP16P51512 607 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 KLF9Q13886 244 aaPredicted RBP14.14□□□□□ -0.15
SSRP1-202ENST00000293880 TMEM92Q6UXU6 159 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 IL11P20809 199 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 RELBQ01201 579 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 ANKRD55Q3KP44 614 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 SLC25A42Q86VD7 318 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 CHAC2Q8WUX2 184 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 PTX4Q96A99 478 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 FAM60AQ9NP50 221 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 TGIF2-C20orf24A0A0A6YYL0 155 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 LILRA5A6NI73 299 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 FAM74A7A6NL05 159 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 RUNX1Q01196 453 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 FAM74A3Q4VXF1 159 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 KRTCAP3Q53RY4 240 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 ZNF707Q96C28 371 aaPredicted RBP14.13□□□□□ -0.15
SSRP1-202ENST00000293880 LMO7DNF2Z398 122 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 F2RL2O00254 374 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 KLK2P20151 261 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 SLC52A3Q9NQ40 469 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 KLHDC2Q9Y2U9 406 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 TBL2Q9Y4P3 447 aaKnown RBP14.13□□□□□ -0.15
SSRP1-202ENST00000293880 OR51B2Q9Y5P1 312 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 NPBWR2P48146 333 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 NUDT10Q8NFP7 164 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 NUDT11Q96G61 164 aa14.13□□□□□ -0.15
SSRP1-202ENST00000293880 COL10A1Q03692 680 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 FAM169BQ8N8A8 192 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 OR4C13Q8NGP0 309 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 PTPMT1Q8WUK0 201 aaPredicted RBP14.12□□□□□ -0.15
SSRP1-202ENST00000293880 YBX2Q9Y2T7 364 aaKnown RBP14.12□□□□□ -0.15
SSRP1-202ENST00000293880 HYAL1Q12794 435 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 EIF3IQ13347 325 aaKnown RBP14.12□□□□□ -0.15
SSRP1-202ENST00000293880 WDR25Q64LD2 544 aaPredicted RBP14.12□□□□□ -0.15
SSRP1-202ENST00000293880 SLC35E3Q7Z769 313 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 GFRA1P56159 465 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 RIPPLY3P57055 190 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 EID2BQ96D98 161 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 UCN2Q96RP3 112 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 HIST1H1EP10412 219 aaKnown RBP14.12□□□□□ -0.15
SSRP1-202ENST00000293880 LIMS2Q7Z4I7 341 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 OR8B3Q8NGG8 313 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 OR8B2Q96RD0 313 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 EVPLQ92817 2033 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 CDX4O14627 284 aaPredicted RBP14.12□□□□□ -0.15
SSRP1-202ENST00000293880 PPYP01298 95 aa14.12□□□□□ -0.15
SSRP1-202ENST00000293880 FAM3BP58499 235 aaPredicted RBP14.12□□□□□ -0.15
SSRP1-202ENST00000293880 HIST1H1BP16401 226 aaKnown RBP14.11□□□□□ -0.15
SSRP1-202ENST00000293880 CXCL2P19875 107 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 DCAF12L2Q5VW00 463 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 OR5R1Q8NH85 324 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 MRGPRX3Q96LB0 322 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 PDE6DO43924 150 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 CXorf1O96002 111 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 ARF6P62330 175 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 SURF2Q15527 256 aaPredicted RBP14.11□□□□□ -0.15
SSRP1-202ENST00000293880 OR8G5Q8NG78 346 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 OR5AC2Q9NZP5 309 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 IGKV3D-11A0A0A0MRZ8 115 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 MFSD2BA6NFX1 497 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 IGKV3-11P04433 115 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 TMEM95Q3KNT9 176 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 ZAR1Q86SH2 424 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 TPRX1Q8N7U7 411 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 CTDSPLO15194 276 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 PLAUP00749 431 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 TMEM108Q6UXF1 575 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 C10orf111Q8N326 155 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 PRR7Q8TB68 274 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 CDK2AP1O14519 115 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 SNAI2O43623 268 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 CXCL10P02778 98 aa14.11□□□□□ -0.15
SSRP1-202ENST00000293880 PPP1CCP36873 323 aaKnown RBP14.1□□□□□ -0.15
SSRP1-202ENST00000293880 PRSS8Q16651 343 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 SNRNP40Q96DI7 357 aaKnown RBP14.1□□□□□ -0.15
SSRP1-202ENST00000293880 SAP30LQ9HAJ7 183 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 PLAC1Q9HBJ0 212 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 MUC1P15941 1255 aaPredicted RBP14.1□□□□□ -0.15
SSRP1-202ENST00000293880 PNRC1Q12796 327 aaPredicted RBP14.1□□□□□ -0.15
SSRP1-202ENST00000293880 MIEN1Q9BRT3 115 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 IL19Q9UHD0 177 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 CYB561D1Q8N8Q1 229 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 P2RX4Q99571 388 aa14.1□□□□□ -0.15
SSRP1-202ENST00000293880 RARRES2Q99969 163 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms