RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 KCNK7Q9Y2U2 307 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 FAM74A7A6NL05 159 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 MGST3O14880 152 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 PRF1P14222 555 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 CCKARP32238 428 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 SERF2P84101 59 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 BLNKQ8WV28 456 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 KCNE5Q9UJ90 142 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 SF3B6Q9Y3B4 125 aaKnown RBP11.12□□□□□ -0.63
PTCD1-201ENST00000292478 PSG2P11465 335 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 ORM2P19652 201 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 ACP1P24666 158 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 GCSAMQ8N6F7 178 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 AQP3Q92482 292 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 OR2J1Q9GZK6 312 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 GPR132Q9UNW8 380 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 PGA5P0DJD9 388 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 VSIG10L2P0DP72 767 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 PRDX2P32119 198 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 UCP2P55851 309 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 KHDC3LQ587J8 217 aa11.12□□□□□ -0.63
PTCD1-201ENST00000292478 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 IFNL4K9M1U5 179 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 HNRNPA3P51991 378 aaKnown RBP11.11□□□□□ -0.63
PTCD1-201ENST00000292478 DOLPP1Q86YN1 238 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 OR1B1Q8NGR6 318 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 CACNA1CQ13936 2221 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 TEX50A0A1B0GTY4 177 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 NPY1RP25929 384 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 TEPPQ6URK8 271 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 MS4A10Q96PG2 267 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
PTCD1-201ENST00000292478 HTR1DP28221 377 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
PTCD1-201ENST00000292478 TOMM20LQ6UXN7 152 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 ZNF441Q8N8Z8 693 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 FAM206AQ9NX38 181 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 RAB29O14966 203 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 G6PCP35575 357 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 COL10A1Q03692 680 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 H1FOOQ8IZA3 346 aaPredicted RBP11.11□□□□□ -0.63
PTCD1-201ENST00000292478 HARBI1Q96MB7 349 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 INSIG2Q9Y5U4 225 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 ARID2Q68CP9 1835 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 PPIAL4EA0A075B759 164 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 A0A1W2PR77 199 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 PPIAL4DF5H284 164 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 CRYBA1P05813 215 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 PPIAL4FP0DN26 164 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 DOK5Q9P104 306 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 PPIAL4AQ9Y536 164 aa11.11□□□□□ -0.63
PTCD1-201ENST00000292478 SPAARA0A1B0GVQ0 90 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 IGSF23A1L1A6 192 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 CDRT15L2A8MXV6 281 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 DAOP14920 347 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 PTTG1IPP53801 180 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 PSG5Q15238 335 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 CCDC144NLQ6NUI1 221 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 OR4D10Q8NGI6 311 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 AESQ08117 197 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 ZXDCQ2QGD7 858 aaPredicted RBP11.1□□□□□ -0.63
PTCD1-201ENST00000292478 OR4P4Q8NGL7 312 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 PRSS3P2Q8NHM4 247 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 Q8WTZ3 238 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 WFDC6Q9BQY6 131 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 IGKV1D-42A0A075B6H8 117 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 MEX3AA1L020 520 aaKnown RBP11.1□□□□□ -0.63
PTCD1-201ENST00000292478 GNG7O60262 68 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 C10orf113Q5VZT2 155 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 WNT2BQ93097 391 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 PRDM14Q9GZV8 571 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 RCC2Q9P258 522 aaKnown RBP11.1□□□□□ -0.63
PTCD1-201ENST00000292478 ZFC3H1O60293 1989 aaKnown RBP11.1□□□□□ -0.63
PTCD1-201ENST00000292478 PTPRZ1P23471 2315 aaPredicted RBP11.1□□□□□ -0.63
PTCD1-201ENST00000292478 C7orf77A4D0Y5 90 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 DEDDO75618 318 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 TOX4O94842 621 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 ATP6V0CP27449 155 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 AMTP48728 403 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 DLK1P80370 383 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 LILRB1Q8NHL6 650 aaPredicted RBP11.1□□□□□ -0.63
PTCD1-201ENST00000292478 AMELYQ99218 206 aa11.1□□□□□ -0.63
PTCD1-201ENST00000292478 HDHD3Q9BSH5 251 aaPredicted RBP11.1□□□□□ -0.63
PTCD1-201ENST00000292478 NUP214P35658 2090 aaPredicted RBP11.09□□□□□ -0.63
PTCD1-201ENST00000292478 CNTRLQ7Z7A1 2325 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 MED19A0JLT2 244 aaPredicted RBP11.09□□□□□ -0.63
PTCD1-201ENST00000292478 SULT1A2P50226 295 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 B2MP61769 119 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 HS3ST3B1Q9Y662 390 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 J3QW42 95 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 MPDU1O75352 247 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 COX6A1P12074 109 aa11.09□□□□□ -0.63
PTCD1-201ENST00000292478 OR1L6Q8NGR2 347 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms