RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ADAT1Q9BUB4 502 aaKnown RBP14.23□□□□□ -0.13
CPSF4-201ENST00000292476 ZNF442Q9H7R0 627 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 OR2S2Q9NQN1 319 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 RCC2Q9P258 522 aaKnown RBP14.23□□□□□ -0.13
CPSF4-201ENST00000292476 FBXL17Q9UF56 701 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 POLDIP2Q9Y2S7 368 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 GPR137BO60478 399 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 SNAPINO95295 136 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 GLAP06280 429 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 CD40P25942 277 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 P2RY1P47900 373 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 FGF12P61328 243 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 FAM76BQ5HYJ3 339 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 ALKBH2Q6NS38 261 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 CALHM1Q8IU99 346 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 Q8IYB0 196 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 COMMD1Q8N668 190 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 GTF3AQ92664 365 aaKnown RBP14.23□□□□□ -0.13
CPSF4-201ENST00000292476 ABHD14BQ96IU4 210 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 ZNF581Q9P0T4 197 aa14.23□□□□□ -0.13
CPSF4-201ENST00000292476 LRRK2Q5S007 2527 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 BORCS7-ASMTA0A0B4J1R7 106 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 J3QT63 122 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 MBPP02686 304 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-201ENST00000292476 ADCYAP1P18509 176 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 CCKARP32238 428 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 MPV17P39210 176 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 FABP6P51161 128 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 F2RL1P55085 397 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 DAZAP2Q15038 168 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-201ENST00000292476 LYPD6BQ8NI32 183 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 OR51I2Q9H344 312 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 UQCC1Q9NVA1 299 aa14.22□□□□□ -0.13
CPSF4-201ENST00000292476 DUXBA0A1W2PPF3 345 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 VSTM5A8MXK1 200 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 F8W036 122 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 OR7C1O76099 320 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-201ENST00000292476 CDS2O95674 445 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 PPYP01298 95 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 CTXN2P0C2S0 81 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 TMEM33P57088 247 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 HAGHLQ6PII5 290 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-201ENST00000292476 BTNL8Q6UX41 500 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 PUSL1Q8N0Z8 303 aaKnown RBP14.21□□□□□ -0.13
CPSF4-201ENST00000292476 NUP37Q8NFH4 326 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 GLYATL2Q8WU03 294 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 CXXC4Q9H2H0 198 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 RIMS4Q9H426 269 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-201ENST00000292476 NDRG3Q9UGV2 375 aa14.21□□□□□ -0.13
CPSF4-201ENST00000292476 LSM5Q9Y4Y9 91 aaKnown RBP14.21□□□□□ -0.13
CPSF4-201ENST00000292476 PIGBOS1A0A0B4J2F0 54 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 FAM74A7A6NL05 159 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 LILRA1O75019 489 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 MED6O75586 246 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 DIRAS3O95661 229 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 NAPSAO96009 420 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 SEC11BP0C7V7 166 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 AADACP22760 399 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 KLF3P57682 345 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-201ENST00000292476 FXYD4P59646 89 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 NKX6-1P78426 367 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-201ENST00000292476 FAM74A3Q4VXF1 159 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 DHRS7BQ6IAN0 325 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-201ENST00000292476 LDLRAD3Q86YD5 345 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 FOXRED2Q8IWF2 684 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 DYRK2Q92630 601 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 RNASE6Q93091 150 aaKnown RBP14.2□□□□□ -0.14
CPSF4-201ENST00000292476 NRIP2Q9BQI9 281 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 SPACA1Q9HBV2 294 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 TREM1Q9NP99 234 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 FAM212BQ9NTI7 297 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-201ENST00000292476 CRIM1Q9NZV1 1036 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 KIR2DS1A0A191URI9 304 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 A0A1B0GWJ7 208 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 ST8SIA3O43173 380 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 IGHV3-13P01766 116 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 ACAA1P09110 424 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-201ENST00000292476 KIR2DS4P43632 304 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 LPAR6P43657 344 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 RAB5CP51148 216 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 KIR2DS1Q14954 304 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 PHLDA2Q53GA4 152 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 BOLLQ8N9W6 283 aaKnown RBP14.2□□□□□ -0.14
CPSF4-201ENST00000292476 SLAMF9Q96A28 289 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 SPIN2AQ99865 258 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 SPIN2BQ9BPZ2 258 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 Q9N2K0 584 aa14.2□□□□□ -0.14
CPSF4-201ENST00000292476 TRBV6-6A0A0A6YYG2 114 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 GPR31O00270 319 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 MPPED1O15442 326 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 ZG16O60844 167 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 FBXO24O75426 580 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 FLI1Q01543 452 aaPredicted RBP14.19□□□□□ -0.14
CPSF4-201ENST00000292476 Q6ZPA2 131 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 LYZL2Q7Z4W2 148 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 WFDC8Q8IUA0 241 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 OR4D5Q8NGN0 318 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 TMEM56Q96MV1 263 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 GINS3Q9BRX5 216 aa14.19□□□□□ -0.14
CPSF4-201ENST00000292476 FGF23Q9GZV9 251 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms