RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 OR3A1P47881 315 aa10.96□□□□□ -0.66
SLC6A1-201ENST00000287766 CDC34P49427 236 aaPredicted RBP10.96□□□□□ -0.66
SLC6A1-201ENST00000287766 CNN1P51911 297 aaKnown RBP10.96□□□□□ -0.66
SLC6A1-201ENST00000287766 G6PC2Q9NQR9 355 aa10.96□□□□□ -0.66
SLC6A1-201ENST00000287766 MPTX1A8MV57 137 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 RRP8O43159 456 aaKnown RBP10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 CLEC3BP05452 202 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 LPAR6P43657 344 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 C3AR1Q16581 482 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 STPG1Q5TH74 334 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 OR4A47Q6IF82 309 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 PRSS3P2Q8NHM4 247 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 ABHD3Q8WU67 409 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 GPHA2Q96T91 129 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 HRASP01112 189 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 CD99P14209 185 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 NAAAQ02083 359 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 LRRC75AQ8NAA5 344 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 FGF11Q92914 225 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 P4HTMQ9NXG6 502 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 VAX2Q9UIW0 290 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 TGIF2-C20orf24A0A0A6YYL0 155 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 GNG4P50150 75 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 PLAURQ03405 335 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 WDR74Q6RFH5 385 aaPredicted RBP10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 GLRX5Q86SX6 157 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 DEFB108BQ8NET1 73 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 MAFAQ8NHW3 353 aaPredicted RBP10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 PI4KAP42356 2102 aa10.95□□□□□ -0.66
SLC6A1-201ENST00000287766 ZNF729A6NN14 1252 aaPredicted RBP10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 C11orf94C9JXX5 98 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 CRYAAP02489 173 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 DEFA4P12838 97 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 CD46P15529 392 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 SULT1A2P50226 295 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 PPOXP50336 477 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 TCTAP57738 103 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 JMJD6Q6NYC1 403 aaPredicted RBP10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 CXorf67Q86X51 503 aaPredicted RBP10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 SGMS2Q8NHU3 365 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 ACY3Q96HD9 319 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 ANXA10Q9UJ72 324 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 PAGE4O60829 102 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 OR2A4O95047 310 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 CCL11P51671 97 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 EWSR1Q01844 656 aaKnown RBP eCLIP10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 ZNF124Q15973 351 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 ST6GALNAC3Q8NDV1 305 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 OR2A7Q96R45 310 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 SLC35B1P78383 322 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 GABRA6Q16445 453 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 SLC36A1Q7Z2H8 476 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 RFESDQ8TAC1 157 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 A0A0J9YW62 118 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 TRGC1P0CF51 173 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 FAM3BP58499 235 aaPredicted RBP10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 Q1RN00 199 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 ZNF343Q6P1L6 599 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 OR5D13Q8NGL4 314 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 NAGKQ9UJ70 344 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 KCNMB2Q9Y691 235 aa10.94□□□□□ -0.66
SLC6A1-201ENST00000287766 SPCS3P61009 180 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 RAC1P63000 192 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 DMWDQ09019 674 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 OR2D3Q8NGH3 330 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 MRPL30Q8TCC3 161 aaKnown RBP10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 SPSB1Q96BD6 273 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 PCGF1Q9BSM1 259 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 ZNF355PQ9NSJ1 428 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 FAM206AQ9NX38 181 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 A0A1W2PR77 199 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 DNASE2O00115 360 aaPredicted RBP10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 FHITP49789 147 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 FUT6P51993 359 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 IL24Q13007 206 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 S100A7AQ86SG5 101 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 ZDHHC23Q8IYP9 409 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 TMEM191AQ9H0A3 160 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 ARRDC1-AS1Q9H2J1 176 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 SLC2A8Q9NY64 477 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 METTL1Q9UBP6 276 aaKnown RBP10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 CTSDP07339 412 aaPredicted RBP10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 P2RY1P47900 373 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 UNC119Q13432 240 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 TRAT1Q6PIZ9 186 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 OR13G1Q8NGZ3 307 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 TWSG1Q9GZX9 223 aa10.93□□□□□ -0.66
SLC6A1-201ENST00000287766 A8MXK9 166 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 FSTP19883 344 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 TNFSF4P23510 183 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 WDR73Q6P4I2 378 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 H1FXQ92522 213 aaKnown RBP10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 LRFN3Q9BTN0 628 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 COMMD5Q9GZQ3 224 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 NKX2-6A6NCS4 301 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 SH2D1BO14796 132 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms