RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C3orf85A0A1B0GTC6 90 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 PHF1O43189 567 aaPredicted RBP8.91□□□□□ -0.98
SKA1-201ENST00000285116 SPRY1O43609 319 aaPredicted RBP8.91□□□□□ -0.98
SKA1-201ENST00000285116 COX6A1P12074 109 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 NKX2-1P43699 371 aaPredicted RBP8.91□□□□□ -0.98
SKA1-201ENST00000285116 FXYD4P59646 89 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 HERV-K104P61576 105 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 CCL7P80098 99 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 FAM90A2PQ658T7 463 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 Q6ZPA2 131 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 TMEM252Q8N6L7 170 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 SLC35G3Q8N808 338 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 NAXEQ8NCW5 288 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 CA5BP1Q8WTZ4 195 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 ZNF816-ZNF321PA0A0X1KG74 233 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 ZNF716A6NP11 495 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 ZNF705GA8MUZ8 300 aaPredicted RBP8.91□□□□□ -0.98
SKA1-201ENST00000285116 ANGPTL7O43827 346 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 PPYP01298 95 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 SLC25A6P12236 298 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 AADACP22760 399 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 OPRM1P35372 400 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 SSR4P51571 173 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 RAB11AP62491 216 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 PRAMEF20Q5VT98 475 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 SLC25A26Q70HW3 274 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 OR5C1Q8NGR4 320 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 SRXN1Q9BYN0 137 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 PRDM14Q9GZV8 571 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 TUSC2O75896 110 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 IL18BPO95998 194 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 GLI4P10075 376 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 CCL3P10147 92 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 OMGP23515 440 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 SRD5A2P31213 254 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 APLNRP35414 380 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 CLDN15P56746 228 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 VAMP2P63027 116 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 DMRTC1Q5HYR2 192 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 RAET1LQ5VY80 246 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 GUSBP11Q6P575 273 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 COLCA1Q6ZS62 124 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 P4HA3Q7Z4N8 544 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 ADGRG7Q96K78 797 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 TP53RKQ96S44 253 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 C1QTNF5Q9BXJ0 243 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 OR2H1Q9GZK4 316 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 CALHM2Q9HA72 323 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 CISD1Q9NZ45 108 aaKnown RBP8.91□□□□□ -0.98
SKA1-201ENST00000285116 VAX2Q9UIW0 290 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 ST3GAL6Q9Y274 331 aa8.91□□□□□ -0.98
SKA1-201ENST00000285116 ATXN7O15265 892 aaPredicted RBP8.9□□□□□ -0.98
SKA1-201ENST00000285116 NAPSAO96009 420 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 TK1P04183 234 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 UMODP07911 640 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 MLF1P58340 268 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 PIGYQ3MUY2 71 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 NMSQ5H8A3 153 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 WDR5BQ86VZ2 330 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 R3HDM4Q96D70 268 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 WNT5BQ9H1J7 359 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 SDF2L1Q9HCN8 221 aa8.9□□□□□ -0.98
SKA1-201ENST00000285116 NKX2-6A6NCS4 301 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 PROB1E7EW31 1015 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 M0R143 59 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 LAMTOR5O43504 91 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 UCP1P25874 307 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 DYNLT3P51808 116 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 ID3Q02535 119 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 ACSF3Q4G176 576 aaPredicted RBP8.9□□□□□ -0.99
SKA1-201ENST00000285116 ZNF774Q6NX45 483 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 H1FOOQ8IZA3 346 aaPredicted RBP8.9□□□□□ -0.99
SKA1-201ENST00000285116 SELENOHQ8IZQ5 122 aaKnown RBP8.9□□□□□ -0.99
SKA1-201ENST00000285116 OR2AE1Q8NHA4 323 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 NAT6Q93015 286 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 TMEM45BQ96B21 275 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 CLDN23Q96B33 292 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.99
SKA1-201ENST00000285116 ACY3Q96HD9 319 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 ATG101Q9BSB4 218 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 SNHG12Q9BXW3 62 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 GLRX2Q9NS18 164 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 ZNF581Q9P0T4 197 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 GNG13Q9P2W3 67 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 CBY1Q9Y3M2 126 aa8.9□□□□□ -0.99
SKA1-201ENST00000285116 MAP1AP78559 2803 aaPredicted RBP8.89□□□□□ -0.99
SKA1-201ENST00000285116 TRBV6-6A0A0A6YYG2 114 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 LCATP04180 440 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 CTXN2P0C2S0 81 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 G0S2P27469 103 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 GNRHRP30968 328 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 COL10A1Q03692 680 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 ZFP36L1Q07352 338 aaKnown RBP8.89□□□□□ -0.99
SKA1-201ENST00000285116 MEX3BQ6ZN04 569 aaKnown RBP8.89□□□□□ -0.99
SKA1-201ENST00000285116 GGNQ86UU5 652 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 OR11L1Q8NGX0 322 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 SAP25Q8TEE9 199 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 SGCZQ96LD1 299 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 IGHV3-15A0A0B4J1V0 119 aa8.89□□□□□ -0.99
SKA1-201ENST00000285116 XKRY2A2RUG3 117 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms