RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ACACBO00763 2458 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 PLXNB3Q9ULL4 1909 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 KNL1Q8NG31 2342 aa3.64□□□□□ -1.83
CD44-202ENST00000278385 URB1O60287 2271 aaKnown RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 CACNA1BQ00975 2339 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 A0A087WUJ7 227 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 A0A0G2JLM5 398 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 A0A0G2JMP0 313 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 MSGN1A6NI15 193 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 METTL15A6NJ78 407 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 NPIPB9F8W1W9 429 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 GPR31O00270 319 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 BHLHE40O14503 412 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 CA11O75493 328 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 SCRG1O75711 98 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 CYB5R3P00387 301 aaPredicted RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 HPNP05981 417 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 MRPL3P09001 348 aaKnown RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 RBMY1CP0DJD4 496 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 HIST1H1TP22492 207 aaPredicted RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 ANOS1P23352 680 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 SLC6A1P30531 599 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 MFAP2P55001 183 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 CDC42P60953 191 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 BAXQ07812 192 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 PUDPQ08623 228 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 ZNF585BQ52M93 769 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 TRMT12Q53H54 448 aaKnown RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 SYT6Q5T7P8 510 aaPredicted RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 OR2T5Q6IEZ7 315 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 C4orf22Q6V702 233 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 IDO2Q6ZQW0 420 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 RASSF6Q6ZTQ3 369 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 ZNF771Q7L3S4 317 aaPredicted RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 GALNT10Q86SR1 603 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 OR4M2Q8NGB6 313 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 OR52E2Q8NGJ4 325 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 OR13C4Q8NGS5 318 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 OR2T29Q8NH02 315 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 OR1P1Q8NH06 330 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 PITPNM3Q9BZ71 974 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 SPNS1Q9H2V7 528 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 RNF167Q9H6Y7 350 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 VSIRQ9H7M9 311 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 NMNAT1Q9HAN9 279 aaPredicted RBP3.63□□□□□ -1.83
CD44-202ENST00000278385 MIEF1Q9NQG6 463 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 TAS2R1Q9NYW7 299 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 ANXA10Q9UJ72 324 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 POU2F3Q9UKI9 436 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 SLC35A3Q9Y2D2 325 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 SIGLEC9Q9Y336 463 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 PRELID3BQ9Y3B1 194 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 KNTC1P50748 2209 aa3.63□□□□□ -1.83
CD44-202ENST00000278385 TMEM131Q92545 1883 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 ZFHX4Q86UP3 3567 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 IGLV3-16A0A075B6K0 115 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 PRORSD1PA6NEY8 169 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 E9PLD3 99 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 F8W036 122 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 THY1P04216 161 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 OR56A5P0C7T3 313 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 CD37P11049 281 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 CD99P14209 185 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 CD1DP15813 335 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 NELFEP18615 380 aaKnown RBP3.62□□□□□ -1.83
CD44-202ENST00000278385 S100GP29377 79 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 TSPOP30536 169 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 PFN2P35080 140 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 CA5AP35218 305 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 PPICP45877 212 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 GPR6P46095 362 aaPredicted RBP3.62□□□□□ -1.83
CD44-202ENST00000278385 ZNF140P52738 457 aaPredicted RBP3.62□□□□□ -1.83
CD44-202ENST00000278385 APOC4P55056 127 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 GFERP55789 205 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 NANOS2P60321 138 aaKnown RBP3.62□□□□□ -1.83
CD44-202ENST00000278385 LMO4P61968 165 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 NUTF2P61970 127 aaKnown RBP3.62□□□□□ -1.83
CD44-202ENST00000278385 PSG4Q00888 419 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 SMAGPQ0VAQ4 97 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 PRSS8Q16651 343 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 LINC00303Q3SY05 128 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 ACSBG2Q5FVE4 666 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 KLF17Q5JT82 389 aaPredicted RBP3.62□□□□□ -1.83
CD44-202ENST00000278385 RPL13AP3Q6NVV1 102 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 ZFP1Q6P2D0 407 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 SFXN4Q6P4A7 337 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 XKRXQ6PP77 449 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 CHMP1BQ7LBR1 199 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 OOSP2Q86WS3 158 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 TMEM86BQ8N661 226 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 ZNF491Q8N8L2 437 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 WDSUB1Q8N9V3 476 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 OR4F15Q8NGB8 312 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 OR10G8Q8NGN5 311 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 OR1L8Q8NGR8 309 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms