RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 HBG1P69891 147 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 HBG2P69892 147 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SRPXP78539 464 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 INSM1Q01101 510 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 KIR2DS1Q14954 304 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ALKBH6Q3KRA9 238 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SPANXN5Q5MJ07 72 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ZNF626Q68DY1 528 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ZNF774Q6NX45 483 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 CDC20BQ86Y33 519 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 OSR2Q8N2R0 312 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 C8orf31Q8N9H6 132 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ZFP62Q8NB50 900 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 NOXO1Q8NFA2 376 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 OR1S2Q8NGQ3 325 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 FGFBP3Q8TAT2 258 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 MRPL53Q96EL3 112 aaKnown RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 AKR1E2Q96JD6 320 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 NIPSNAP3BQ9BS92 247 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 CHST6Q9GZX3 395 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 C5orf66Q9H5L9 145 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 NARFLQ9H6Q4 476 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 PLEKHF2Q9H8W4 249 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 NTMQ9P121 344 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ICAM5Q9UMF0 924 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 DSPPQ9NZW4 1301 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 PTPRQQ9UMZ3 2332 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 LOC105371242A0A075B767 164 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 A0A0G2JK05 382 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 MED19A0JLT2 244 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 C9orf170A2RU37 121 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 H3BP45 60 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 TAAR5O14804 337 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SOCS1O15524 211 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 BCL2L11O43521 198 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 TRIAP1O43715 76 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ADAP1O75689 374 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 CST7O76096 145 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 GLAP06280 429 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 TBPP20226 339 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 BCKDHBP21953 392 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 NFYBP25208 207 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SNCAP37840 140 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 RRADP55042 308 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 NDUFA6P56556 154 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 TAS2R30P59541 319 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 IFITM2Q01629 132 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SSBP1Q04837 148 aaKnown RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 BAXQ07812 192 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 CATR1Q13166 79 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SKP2Q13309 424 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 PLGLAQ15195 96 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 TBC1D28Q2M2D7 210 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 LCN15Q6UWW0 184 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SLC22A18ASQ8N1D0 253 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 C9orf62Q8N4C0 152 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SPICQ8N5J4 248 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 OR4A16Q8NH70 328 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 OR1F12Q8NHA8 337 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ASB5Q8WWX0 329 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 PP6455Q8WZ26 134 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ZC3HAV1LQ96H79 300 aaKnown RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 DHRS9Q9BPW9 319 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SLC17A5Q9NRA2 495 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 TMEM100Q9NV29 134 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 OCIAD1Q9NX40 245 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ST6GALNAC2Q9UJ37 374 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 PILRAQ9UKJ1 303 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 FAM96BQ9Y3D0 163 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 COL6A3P12111 3177 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 LOC105371267A0A1B0GV96 52 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 A0A1W2PR80 420 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 OR6C6A6NF89 314 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 RNF212BA8MTL3 300 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ZNF705FA8MVS1 300 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 E5RGE8 158 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 MBTPS2O43462 519 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 GSTZ1O43708 216 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 SEMA7AO75326 666 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 TNFSF15O95150 251 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 MPC2O95563 127 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 MT-CO2P00403 227 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 NGFRP08138 427 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 ZNF705DP0CH99 300 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 ZNF705BP0CI00 300 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 SULT1A3P0DMM9 295 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SULT1A4P0DMN0 295 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 CD37P11049 281 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 CCL4P13236 92 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 HIST1H1DP16402 221 aaKnown RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 KITLGP21583 273 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 FUT6P51993 359 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 RPS4XP62701 263 aaKnown RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 KLF9Q13886 244 aaPredicted RBP2.47□□□□□ -2.01
HERC4-201ENST00000277817 OR8G1Q15617 311 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 HMGN3Q15651 99 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 BEAN1Q3B7T3 259 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 SIGIRRQ6IA17 410 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 RHBDD2Q6NTF9 364 aa2.47□□□□□ -2.01
HERC4-201ENST00000277817 RBMS3Q6XE24 437 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms