RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM50BP56557 158 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 FZD5Q13467 585 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 GGTLC2Q14390 218 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 TNXAQ16473 311 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ERASQ7Z444 233 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 MUC15Q8N387 334 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM30AQ9NV96 361 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 M0R3E3 92 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 METAP1P53582 386 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 LIMS2Q7Z4I7 341 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ZNF383Q8NA42 475 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 P2RX4Q99571 388 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 M0R296 226 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 RHBDL1O75783 438 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ZNF738Q8NE65 137 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 OR5M9Q8NGP3 310 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 RHOVQ96L33 236 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 PPYP01298 95 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 MYOGP15173 224 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 PGFP49763 221 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ATG4DQ86TL0 474 aaPredicted RBP7.02□□□□□ -1.29
LIMD1-201ENST00000273317 C7orf77A4D0Y5 90 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 MPDU1O75352 247 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 CD3EP07766 207 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM255AQ5JRV8 349 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 GAPTQ8N292 157 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 FOXC2Q99958 501 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 MRPS16Q9Y3D3 137 aaKnown RBP7.02□□□□□ -1.29
LIMD1-201ENST00000273317 KCNAB3O43448 404 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 PSG5Q15238 335 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ACER2Q5QJU3 275 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 OR2I1PQ8NGU4 316 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 COX14Q96I36 57 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 SAP30LQ9HAJ7 183 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 FUT9Q9Y231 359 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 CTSVO60911 334 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ZNF253O75346 499 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 HBZP02008 142 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 ACAA1P09110 424 aaPredicted RBP7.02□□□□□ -1.29
LIMD1-201ENST00000273317 FSTP19883 344 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 SLC23A3Q6PIS1 610 aa7.02□□□□□ -1.29
LIMD1-201ENST00000273317 IER3P46695 156 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 OR1N2Q8NGR9 330 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 ALX4Q9H161 411 aaPredicted RBP7.01□□□□□ -1.29
LIMD1-201ENST00000273317 OR4C46A6NHA9 309 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 J3QT63 122 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 CHST1O43916 411 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 GNG7O60262 68 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 HLA-DQA1P01909 254 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 OR4A8P0C604 315 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 MVDP53602 400 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 RELBQ01201 579 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 MOGAT1Q96PD6 335 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 OR2V2Q96R30 315 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 PIPOXQ9P0Z9 390 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 GZMHP20718 246 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 C16orf82Q7Z2V1 217 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 CBLN2Q8IUK8 224 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 A0A1W2PRD5 423 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 A0A1W2PRF3 423 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 A0A1W2PRM7 423 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 J3KRW8 73 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 WIPI1Q5MNZ9 446 aaPredicted RBP7.01□□□□□ -1.29
LIMD1-201ENST00000273317 MTURNQ8N3F0 131 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 RAB37Q96AX2 223 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 VSTM2LQ96N03 204 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 CHRNA10Q9GZZ6 450 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 LYPD8Q6UX82 237 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 THSD4Q6ZMP0 1018 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 HOGA1Q86XE5 327 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 OR51B2Q9Y5P1 312 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 RPS20P60866 119 aaKnown RBP7.01□□□□□ -1.29
LIMD1-201ENST00000273317 ZXDAP98168 799 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 ZNF273Q14593 569 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 SPINK9Q5DT21 86 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 TEPPQ6URK8 271 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM140Q9NV12 185 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 MIOXQ9UGB7 285 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 B4E171 279 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 H0Y980 276 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 COMPP49747 757 aaPredicted RBP7.01□□□□□ -1.29
LIMD1-201ENST00000273317 SLC35E4Q6ICL7 350 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 NTMQ9P121 344 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.01□□□□□ -1.29
LIMD1-201ENST00000273317 TRBV9A0A0B4J1U6 114 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM196Q5HYL7 178 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 FLYWCH2Q96CP2 140 aaKnown RBP7.01□□□□□ -1.29
LIMD1-201ENST00000273317 WDR13Q9H1Z4 485 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 FRRS1LQ9P0K9 344 aa7.01□□□□□ -1.29
LIMD1-201ENST00000273317 POLR2GP62487 172 aaKnown RBP eCLIP7□□□□□ -1.29
LIMD1-201ENST00000273317 EWSR1Q01844 656 aaKnown RBP eCLIP7□□□□□ -1.29
LIMD1-201ENST00000273317 Q8WTZ3 238 aa7□□□□□ -1.29
LIMD1-201ENST00000273317 FAM131CQ96AQ9 280 aa7□□□□□ -1.29
LIMD1-201ENST00000273317 PMCHL2Q9BQD1 86 aa7□□□□□ -1.29
LIMD1-201ENST00000273317 RSG1Q9BU20 258 aa7□□□□□ -1.29
LIMD1-201ENST00000273317 VSIG4Q9Y279 399 aa7□□□□□ -1.29
LIMD1-201ENST00000273317 A0A1W2PR80 420 aa7□□□□□ -1.29
LIMD1-201ENST00000273317 NKX2-6A6NCS4 301 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms