RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 OPN4Q9UHM6 478 aa19.03■□□□□ 0.64
SMARCB1-201ENST00000263121 TMPRSS2O15393 492 aa19.02■□□□□ 0.64
SMARCB1-201ENST00000263121 UBR5O95071 2799 aaPredicted RBP19.02■□□□□ 0.64
SMARCB1-201ENST00000263121 HBZP02008 142 aa19.02■□□□□ 0.64
SMARCB1-201ENST00000263121 SLC38A6Q8IZM9 456 aa19.02■□□□□ 0.64
SMARCB1-201ENST00000263121 RSRP1Q9BUV0 290 aa19.02■□□□□ 0.64
SMARCB1-201ENST00000263121 C15orf65H3BRN8 121 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 HEXAP06865 529 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 RPS2P15880 293 aaKnown RBP19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 EDDM3BP56851 147 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 KCNJ8Q15842 424 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 SPICQ8N5J4 248 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 GALMQ96C23 342 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 TMEM246Q9BRR3 403 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 KAAG1Q9UBP8 84 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 OR2W1Q9Y3N9 320 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 IGKV1D-13A0A0B4J2D9 117 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 IGKV1-13P0DP09 117 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 SSTR5P35346 364 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 SUPT4H1P63272 117 aaKnown RBP19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 TLE4Q04727 773 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 C12orf45Q8N5I9 185 aaPredicted RBP19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 OR2AK2Q8NG84 335 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 C14orf79Q96F83 325 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 FYTTD1Q96QD9 318 aaKnown RBP19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 OR6C3Q9NZP0 311 aa19.01■□□□□ 0.63
SMARCB1-201ENST00000263121 USP9XQ93008 2570 aaPredicted RBP19■□□□□ 0.63
SMARCB1-201ENST00000263121 FLNCQ14315 2725 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 NDUFA2O43678 99 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 GZMHP20718 246 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 VAMP1P23763 118 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 LYPD2Q6UXB3 125 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 TCTE3Q8IZS6 198 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 MITD1Q8WV92 249 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 ARL11Q969Q4 196 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 ZNF486Q96H40 463 aaPredicted RBP19■□□□□ 0.63
SMARCB1-201ENST00000263121 TOLLIPQ9H0E2 274 aa19■□□□□ 0.63
SMARCB1-201ENST00000263121 ADAM20O43506 726 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 FCN3O75636 299 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 SFT2D2O95562 160 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 DUS4LO95620 317 aaKnown RBP18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 IGHV2-70P01814 119 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 CGB3P0DN86 165 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 CGB7P0DN87 165 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 IL2RGP31785 369 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 LPCAT3Q6P1A2 487 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 LDLRAD3Q86YD5 345 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 FGFRL1Q8N441 504 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 ZNF565Q8N9K5 539 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 MGAT4CQ9UBM8 478 aa18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 SLC25A10Q9UBX3 287 aaPredicted RBP18.99■□□□□ 0.63
SMARCB1-201ENST00000263121 CRYM-AS1A6NIL9 109 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 SPINT2O43291 252 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 HSPA12AO43301 675 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 LY6HO94772 140 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 GNRHRP30968 328 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 PIGPP57054 158 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CLEC18BQ6UXF7 455 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 SECTM1Q8WVN6 248 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CLEC4MQ9H2X3 399 aaPredicted RBP18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 SLC2A9Q9NRM0 540 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 RDH8Q9NYR8 311 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CTSZQ9UBR2 303 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 MEX3AA1L020 520 aaKnown RBP18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CLEC18AA5D8T8 446 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 DAOP14920 347 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CD34P28906 385 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CDKN1AP38936 164 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CEACAM6P40199 344 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 HTD2P86397 168 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 C2orf68Q2NKX9 166 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 ABCA11PQ4W5N1 156 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 KIAA2026Q5HYC2 2103 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 TCF23Q7RTU1 214 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 CLEC18CQ8NCF0 446 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 SLC5A7Q9GZV3 580 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 PLEKHF2Q9H8W4 249 aa18.98■□□□□ 0.63
SMARCB1-201ENST00000263121 LRBAP50851 2863 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 ANXA3P12429 323 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 UXS1Q8NBZ7 420 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 OR52L2PQ8NGH6 319 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 CASTOR1Q8WTX7 329 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 CORO2AQ92828 525 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 PHB2Q99623 299 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 PARP12Q9H0J9 701 aaKnown RBP18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 DSCAML1Q8TD84 2053 aa18.97■□□□□ 0.63
SMARCB1-201ENST00000263121 CLDN1O95832 211 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 NDUFB7P17568 137 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 PHLDA2Q53GA4 152 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 SGPP2Q8IWX5 399 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 OR10V1Q8NGI7 309 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 RFESDQ8TAC1 157 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 IGFBPL1Q8WX77 278 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 DMRTB1Q96MA1 342 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 ZNF436Q9C0F3 470 aaPredicted RBP18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 CALYQ9NYX4 217 aa18.96■□□□□ 0.63
SMARCB1-201ENST00000263121 TRGV10A0A0A0MS01 117 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 A0A0B4J2A0 478 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 F2RL2O00254 374 aa18.95■□□□□ 0.62
SMARCB1-201ENST00000263121 NDUFB3O43676 98 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 265.1 ms