RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SP9P0CG40 484 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 RPL13AP40429 203 aaKnown RBP3.77□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF83P51522 516 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 PAX5Q02548 391 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 FOXC1Q12948 553 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 HERPUD1Q15011 391 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 STUMQ69YW2 141 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 CLN8Q9UBY8 286 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 WASHC3Q9Y3C0 194 aa3.77□□□□□ -1.81
VPS13C-202ENST00000261517 DBX1A6NMT0 343 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FFAR1O14842 300 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OR4A8P0C604 315 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OPRK1P41145 380 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OR5I1Q13606 314 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 HYAL4Q2M3T9 481 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PAPPA-AS1Q5QFB9 102 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ERRFI1Q9UJM3 462 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SOX21Q9Y651 276 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 LOC102723996A0A087X1L8 192 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 CLDN14O95500 239 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FTH1P19P0C7X4 201 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 MPZP25189 248 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ERVFC1-1P60608 527 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 VASH2Q86V25 355 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 MRPL30Q8TCC3 161 aaKnown RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ADAMTS17Q8TE56 1095 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SCNM1Q9BWG6 230 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 AREGP15514 252 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 CA6P23280 308 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 KIAA0141Q14154 515 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 GUK1Q16774 197 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM97Q5BJF2 176 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF439Q8NDP4 499 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OR1K1Q8NGR3 316 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 AQP3Q92482 292 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF714Q96N38 554 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SDK2Q58EX2 2172 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PPIAL4EA0A075B759 164 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PPIAL4DF5H284 164 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 AGPAT2O15120 278 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OPN1LWP04000 364 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PPIAL4FP0DN26 164 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PEBP1P30086 187 aaKnown RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ERASQ7Z444 233 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 UBAC2Q8NBM4 344 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 MOGAT1Q96PD6 335 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FAM60AQ9NP50 221 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 CACNG5Q9UF02 275 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PPIAL4AQ9Y536 164 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 UBE2L5PA0A1B0GUS4 154 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ADAM20O43506 726 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 CRISP2P16562 243 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 NAT1P18440 290 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SNRPNP63162 240 aaKnown RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TEPPQ6URK8 271 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SYT8Q8NBV8 401 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 UBALD1Q8TB05 177 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 UBE2FQ969M7 185 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FOXN4Q96NZ1 517 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TUBD1Q9UJT1 453 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 RNF115Q9Y4L5 304 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 WIPI2Q9Y4P8 454 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 THSD7BQ9C0I4 1608 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TICRRQ7Z2Z1 1910 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ROS1P08922 2347 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 GLRXP35754 106 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PPP1R1AQ13522 171 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 Q6AWC8 147 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FAM122AQ96E09 287 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OR2V2Q96R30 315 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 GPR27Q9NS67 375 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 Q56UQ5 140 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF385CQ66K41 422 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF429Q86V71 674 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 WDR89Q96FK6 387 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ABHD14AQ9BUJ0 271 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TM2D1Q9BX74 207 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 IGKV3D-11A0A0A0MRZ8 115 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF737O75373 536 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 COX6A1P12074 109 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 NPY1RP25929 384 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 RPL11P62913 178 aaKnown RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 CACNG8Q8WXS5 425 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 LRFN3Q9BTN0 628 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ANKRD10Q9NXR5 420 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SH3BGRL2Q9UJC5 107 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OOSP1A8MZH6 123 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 DLL1O00548 723 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ZIC2O95409 532 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 CD74P04233 296 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 UCP2P55851 309 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FAM3BP58499 235 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TLE1Q04724 770 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF146Q15072 292 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM183BQ1AE95 376 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SFTPA2Q8IWL1 248 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SFTPA1Q8IWL2 248 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 LYG1Q8N1E2 194 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 NPVFQ9HCQ7 196 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 LIPGQ9Y5X9 500 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms