RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 H1FOOQ8IZA3 346 aaPredicted RBP18.71■□□□□ 0.59
SIX3-201ENST00000260653 DIRC2Q96SL1 478 aa18.71■□□□□ 0.59
SIX3-201ENST00000260653 RNF115Q9Y4L5 304 aa18.71■□□□□ 0.59
SIX3-201ENST00000260653 C13orf42A0A1B0GVH6 325 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 GNLYP22749 145 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 SP6Q3SY56 376 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 ERGIC1Q969X5 290 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 HCFC1P51610 2035 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 MEX3AA1L020 520 aaKnown RBP18.7■□□□□ 0.58
SIX3-201ENST00000260653 C5orf51A6NDU8 294 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 MPTX1A8MV57 137 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 CD8AP01732 235 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 M6PRP20645 277 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 EDDM3AQ14507 147 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 BEX5Q5H9J7 111 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 ZNF818PQ6ZRF7 136 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 ZNRF1Q8ND25 227 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 ANGPTL6Q8NI99 470 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 SLC5A7Q9GZV3 580 aa18.7■□□□□ 0.58
SIX3-201ENST00000260653 TRAV14DV4A0A0A6YYC5 116 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 OR5AC1P0C628 307 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 TNFRSF1AP19438 455 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 BPIFB3P59826 476 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 ZNF565Q8N9K5 539 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 FAM222BQ8WU58 562 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 RAB18Q9NP72 206 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 OR2W1Q9Y3N9 320 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 C12orf77C9JDV5 145 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 NPIPB11E5RHQ5 1161 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 SSTR2P30874 369 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 LRRC37A5PQ49AS3 106 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 MRGPRDQ8TDS7 321 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 SAP30LQ9HAJ7 183 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 KCNIP1Q9NZI2 227 aa18.69■□□□□ 0.58
SIX3-201ENST00000260653 FXYD6-FXYD2A0A087WZ82 144 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 APOBEC3AP31941 199 aaPredicted RBP18.68■□□□□ 0.58
SIX3-201ENST00000260653 POLR2GP62487 172 aaKnown RBP eCLIP18.68■□□□□ 0.58
SIX3-201ENST00000260653 TESK1Q15569 626 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 GSG1LQ6UXU4 331 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 OR1L1Q8NH94 360 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 GALNT14Q96FL9 552 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 GPHA2Q96T91 129 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 DYNLRB1Q9NP97 96 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 CCL28Q9NRJ3 127 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 CISD1Q9NZ45 108 aaKnown RBP18.68■□□□□ 0.58
SIX3-201ENST00000260653 MAB21L2Q9Y586 359 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 RAI1Q7Z5J4 1906 aaPredicted RBP18.68■□□□□ 0.58
SIX3-201ENST00000260653 PCP4L1A6NKN8 68 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 HSD17B6O14756 317 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 HSPA12AO43301 675 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 HOXB5P09067 269 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 SELLP14151 372 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 MST1LQ2TV78 715 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 CCDC71LQ8N9Z2 235 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 DEFB108BQ8NET1 73 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 OR13A1Q8NGR1 328 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 PPP1R1CQ8WVI7 109 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 METTL8Q9H825 291 aaKnown RBP18.68■□□□□ 0.58
SIX3-201ENST00000260653 SEBOXQ9HB31 216 aaPredicted RBP18.68■□□□□ 0.58
SIX3-201ENST00000260653 KCNIP3Q9Y2W7 256 aa18.68■□□□□ 0.58
SIX3-201ENST00000260653 DEFB108AA8MXU0 73 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 ZG16O60844 167 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 TMEM187Q14656 261 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 SVIPQ8NHG7 77 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 SNX22Q96L94 193 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 DCTN5Q9BTE1 182 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 PARP12Q9H0J9 701 aaKnown RBP18.67■□□□□ 0.58
SIX3-201ENST00000260653 ZFYVE26Q68DK2 2539 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 OOEPA6NGQ2 149 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 IRF2P14316 349 aa18.67■□□□□ 0.58
SIX3-201ENST00000260653 A0A1B0GW55 424 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 GPR31O00270 319 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 ARPC5O15511 151 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 TSC22D2O75157 780 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4L2P0CJ85 424 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4L3P0CJ86 424 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4L4P0CJ87 422 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4L5P0CJ88 424 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4L6P0CJ89 424 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4L7P0CJ90 424 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 PAX5Q02548 391 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 C4orf17Q53FE4 359 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 STUMQ69YW2 141 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4L9Q6RFH8 374 aaPredicted RBP18.66■□□□□ 0.58
SIX3-201ENST00000260653 DNTTIP1Q9H147 329 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 RDH8Q9NYR8 311 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 DUX4Q9UBX2 424 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 LRBAP50851 2863 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 MPPED1O15442 326 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 HBZP02008 142 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 HEXAP06865 529 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 CXCL2P19875 107 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 SSTR5P35346 364 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 EFNB3Q15768 340 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 OR10C1Q96KK4 312 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 TP53RKQ96S44 253 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 EGLN1Q9GZT9 426 aa18.66■□□□□ 0.58
SIX3-201ENST00000260653 K7N7A8 449 aa18.65■□□□□ 0.58
SIX3-201ENST00000260653 RGS13O14921 159 aa18.65■□□□□ 0.58
SIX3-201ENST00000260653 PHF1O43189 567 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms