RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZNF561Q8N587 486 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 GPER1Q99527 375 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 ARL6Q9H0F7 186 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 ALX4Q9H161 411 aaPredicted RBP13.86□□□□□ -0.19
SDCBP-201ENST00000260130 ATG5Q9H1Y0 275 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 NAV3Q8IVL0 2385 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 FXYD6-FXYD2A0A087WZ82 144 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 KDM4BO94953 1096 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 MELTFP08582 738 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 FSTP19883 344 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 BDKRB2P30411 391 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 CEBPDP49716 269 aaPredicted RBP13.86□□□□□ -0.19
SDCBP-201ENST00000260130 TAS2R19P59542 299 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 GUCA2AQ02747 115 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.86□□□□□ -0.19
SDCBP-201ENST00000260130 PNLDC1Q8NA58 520 aaKnown RBP13.86□□□□□ -0.19
SDCBP-201ENST00000260130 OR4D10Q8NGI6 311 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 GPX8Q8TED1 209 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 FXYD6Q9H0Q3 95 aa13.86□□□□□ -0.19
SDCBP-201ENST00000260130 RPUSD1Q9UJJ7 312 aaKnown RBP13.86□□□□□ -0.19
SDCBP-201ENST00000260130 BET1O15155 118 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 SIX6O95475 246 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 NMBP08949 121 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 C4orf46Q504U0 113 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 C11orf88Q6PI97 169 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 FIP1L1Q6UN15 594 aaKnown RBP13.85□□□□□ -0.19
SDCBP-201ENST00000260130 GSG1LQ6UXU4 331 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 CDH26Q8IXH8 852 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 TMEM185AQ8NFB2 350 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 NANPQ8TBE9 248 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 WDR89Q96FK6 387 aaPredicted RBP13.85□□□□□ -0.19
SDCBP-201ENST00000260130 RHOFQ9HBH0 211 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 METRNQ9UJH8 293 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 CUBNO60494 3623 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 TMEM272A0A1B0GTI8 110 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 KRBOX1C9JBD0 128 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 CD3DP04234 171 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 NDUFB7P17568 137 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 ZNF93P35789 620 aaPredicted RBP13.85□□□□□ -0.19
SDCBP-201ENST00000260130 NUP62P37198 522 aaPredicted RBP13.85□□□□□ -0.19
SDCBP-201ENST00000260130 C1QL2Q7Z5L3 287 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 TMEM229BQ8NBD8 167 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 PXT1Q8NFP0 134 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 COQ8AQ8NI60 647 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 DCTN5Q9BTE1 182 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 SCPEP1Q9HB40 452 aa13.85□□□□□ -0.19
SDCBP-201ENST00000260130 WNK2Q9Y3S1 2297 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 LPLP06858 475 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 SFTPBP07988 381 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 CHRM2P08172 466 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 PPIAL4GP0DN37 164 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 PRKACAP17612 351 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 CAPZA1P52907 286 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 C2orf68Q2NKX9 166 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 SLC51BQ86UW2 128 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 H1FXQ92522 213 aaKnown RBP13.84□□□□□ -0.19
SDCBP-201ENST00000260130 SLC25A21Q9BQT8 299 aaPredicted RBP13.84□□□□□ -0.19
SDCBP-201ENST00000260130 SEBOXQ9HB31 216 aaPredicted RBP13.84□□□□□ -0.19
SDCBP-201ENST00000260130 IL36RNQ9UBH0 155 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 JMJD1CQ15652 2540 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 DOCK11Q5JSL3 2073 aa13.84□□□□□ -0.19
SDCBP-201ENST00000260130 MEIS3P1A6NDR6 274 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 RPA2P15927 270 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 HTR2CP28335 458 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 COL10A1Q03692 680 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 SPIN3Q5JUX0 258 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 ALKAL2Q6UX46 152 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 LY6G5BQ8NDX9 201 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 CNTD2Q9H8S5 307 aa13.83□□□□□ -0.19
SDCBP-201ENST00000260130 A0A0A6YYH2 397 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 MEGF11A6BM72 1044 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 A6NJ64 397 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 H3BUI4 141 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 RAB3DO95716 219 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 PTGFRP43088 359 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 FGF12P61328 243 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 ZNF146Q15072 292 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 OVCH2Q7RTZ1 564 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 SLC25A28Q96A46 364 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 CXorf58Q96LI9 332 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 NKX3-1Q99801 234 aaPredicted RBP13.83□□□□□ -0.2
SDCBP-201ENST00000260130 FAM234AQ9H0X4 552 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 GLS2Q9UI32 602 aa13.83□□□□□ -0.2
SDCBP-201ENST00000260130 HAND1O96004 215 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 IFNA2P01563 188 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 TK1P04183 234 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 DUSP1P28562 367 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 OR3A4PP47883 348 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 ASCL4Q6XD76 172 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 PRIMA1Q86XR5 153 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 OR6M1Q8NGM8 313 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 C8orf46Q8TAG6 207 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 KCNK15Q9H427 330 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 ELL3Q9HB65 397 aaPredicted RBP13.82□□□□□ -0.2
SDCBP-201ENST00000260130 ZNF107Q9UII5 783 aaPredicted RBP13.82□□□□□ -0.2
SDCBP-201ENST00000260130 TMEM82A0PJX8 343 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 K7N7A8 449 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 FSHBP01225 129 aa13.82□□□□□ -0.2
SDCBP-201ENST00000260130 SNU13P55769 128 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms