RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 MSMPQ1L6U9 139 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 GPR157Q5UAW9 335 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 BAP18Q8IXM2 172 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 ITLN1Q8WWA0 313 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 GMPPAQ96IJ6 420 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-201ENST00000258607 C2orf50Q96LR7 162 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 NAA60Q9H7X0 242 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 ATP23Q9Y6H3 246 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 A0A0G2JRQ6 117 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 ZNF891A8MT65 544 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-201ENST00000258607 SCGNO76038 276 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 RPS2P15880 293 aaKnown RBP7.71□□□□□ -1.18
CKAP2-201ENST00000258607 GRNP28799 593 aaKnown RBP7.71□□□□□ -1.18
CKAP2-201ENST00000258607 NKX2-1P43699 371 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-201ENST00000258607 TAS2R31P59538 309 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 COL10A1Q03692 680 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 GABRA6Q16445 453 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 RGS7BPQ6MZT1 257 aaPredicted RBP7.71□□□□□ -1.18
CKAP2-201ENST00000258607 ZNF529Q6P280 563 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 LCN15Q6UWW0 184 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 ZDHHC22Q8N966 263 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 ISOC2Q96AB3 205 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 LRRC46Q96FV0 321 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 SCGB3A2Q96PL1 93 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 TAAR3PQ9P1P4 343 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
CKAP2-201ENST00000258607 TMPRSS2O15393 492 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 MPPED1O15442 326 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 CHST1O43916 411 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 RAMP3O60896 148 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 HAND1O96004 215 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 TPT1P13693 172 aaKnown RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 EIF2S3LQ2VIR3 472 aaKnown RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 FAM209AQ5JX71 171 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 BHLHA15Q7RTS1 189 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 OR5P3Q8WZ94 311 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 CCL13Q99616 98 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 FANCFQ9NPI8 374 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 RASL12Q9NYN1 266 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 FLNBO75369 2602 aaKnown RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 IGHV3-72A0A0B4J1Y9 119 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 FAM74A7A6NL05 159 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 BCL2L11O43521 198 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 GYPAP02724 150 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 SNRNP70P08621 437 aaKnown RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 KIAA0141Q14154 515 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 PNLIPRP3Q17RR3 467 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 FAM74A3Q4VXF1 159 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 KRBOX4Q5JUW0 171 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 ZNF474Q6S9Z5 364 aaPredicted RBP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 OR5C1Q8NGR4 320 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 IP6K3Q96PC2 410 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 PRRX2Q99811 253 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 MYOD1P15172 320 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 EGR1P18146 543 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 FGF12P61328 243 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 ZNF718Q3SXZ3 478 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 NHLRC3Q5JS37 347 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 TMEM65Q6PI78 240 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 TMEM204Q9BSN7 226 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 RSG1Q9BU20 258 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 OPA3Q9H6K4 179 aa7.7□□□□□ -1.18
CKAP2-201ENST00000258607 PUS1Q9Y606 427 aaKnown RBP eCLIP7.7□□□□□ -1.18
CKAP2-201ENST00000258607 IGSF10Q6WRI0 2623 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 DSCAMO60469 2012 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 PQLC2LA1A4F0 135 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 CD55P08174 381 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 Q6ZR03 302 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 FAM89BQ8N5H3 189 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 FAM216BQ8N7L0 139 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 STARD4Q96DR4 205 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 AKR1E2Q96JD6 320 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 PRDM14Q9GZV8 571 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 KCNIP1Q9NZI2 227 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 RCC2Q9P258 522 aaKnown RBP7.69□□□□□ -1.18
CKAP2-201ENST00000258607 CLN8Q9UBY8 286 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 ZFP92A6NM28 416 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 PRRG2O14669 202 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 ST8SIA3O43173 380 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 GFRA3O60609 400 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 IFNA17P01571 189 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 LPAR6P43657 344 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 SCAND1P57086 179 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 HIST1H3AP68431 136 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 RPL39P5Q59GN2 51 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 VAX1Q5SQQ9 334 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 HIST2H3PS2Q5TEC6 136 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 Q6ZT83 130 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 HIST2H3AQ71DI3 136 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 THNSL2Q86YJ6 484 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 LGI3Q8N145 548 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 DMBX1Q8NFW5 382 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 OR13A1Q8NGR1 328 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 MED30Q96HR3 178 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 PURGQ9UJV8 347 aaKnown RBP7.69□□□□□ -1.18
CKAP2-201ENST00000258607 HECTD1Q9ULT8 2610 aa7.69□□□□□ -1.18
CKAP2-201ENST00000258607 IGHV1-18A0A0C4DH31 117 aa7.68□□□□□ -1.18
CKAP2-201ENST00000258607 RPL36A-HNRNPH2H7BZ11 118 aa7.68□□□□□ -1.18
CKAP2-201ENST00000258607 SH2D1BO14796 132 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms