RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 EMC6Q9BV81 110 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 PARD6GQ9BYG4 376 aaPredicted RBP3.59□□□□□ -1.83
UBE4A-201ENST00000252108 C11orf1Q9H5F2 150 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 ATXN7L1Q9ULK2 861 aaPredicted RBP3.59□□□□□ -1.83
UBE4A-201ENST00000252108 CTXND1A0A1B0GTU2 59 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 A0A1B0GV50 99 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 MAP1LC3B2A6NCE7 125 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 OR5B21A6NL26 309 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 CYTIPO60759 359 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 TNFSF15O95150 251 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 DBHP09172 617 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 OMGP23515 440 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 GALR1P47211 349 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 TMPRSS3P57727 454 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 RPS23P62266 143 aaKnown RBP3.59□□□□□ -1.83
UBE4A-201ENST00000252108 SMAD4Q13485 552 aaKnown RBP3.59□□□□□ -1.83
UBE4A-201ENST00000252108 SLC10A1Q14973 349 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 ASCL4Q6XD76 172 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 FBXL14Q8N1E6 418 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 OR10P1Q8NGE3 313 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 OR11L1Q8NGX0 322 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 OR2T10Q8NGZ9 312 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 TMEM56Q96MV1 263 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 MAP1LC3BQ9GZQ8 125 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 PRSS50Q9UI38 385 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 FOXD3Q9UJU5 478 aaPredicted RBP3.59□□□□□ -1.83
UBE4A-201ENST00000252108 TMEM56-RWDD3S4R434 201 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 PMS2P1A4D2B8 440 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 FAM24AA6NFZ4 105 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 NTN3O00634 580 aaPredicted RBP3.59□□□□□ -1.83
UBE4A-201ENST00000252108 PHOX2AO14813 284 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 TCAPO15273 167 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 CLEC3BP05452 202 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 AKR1C3P42330 323 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 RTL8BQ17RB0 113 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 TMEM183BQ1AE95 376 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 WDR73Q6P4I2 378 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 Q6ZS49 121 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 C6orf201Q7Z4U5 140 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 ZDHHC23Q8IYP9 409 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 Q8NFD4 153 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 OR56B2PQ8NGI1 322 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 OR2I1PQ8NGU4 316 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 SMOC1Q9H4F8 434 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 CRLF2Q9HC73 371 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF586Q9NXT0 402 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 ZNF319Q9P2F9 582 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 BOKQ9UMX3 212 aaPredicted RBP3.59□□□□□ -1.83
UBE4A-201ENST00000252108 LIPGQ9Y5X9 500 aa3.59□□□□□ -1.83
UBE4A-201ENST00000252108 ARHGAP21Q5T5U3 1957 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 LNP1A1A4G5 178 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 XKRY2A2RUG3 117 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 CBR3O75828 277 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 MPZL1O95297 269 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 F12P00748 615 aaPredicted RBP3.59□□□□□ -1.84
UBE4A-201ENST00000252108 HRASP01112 189 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 DYNLT3P51808 116 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 B3GALT5-AS1P59052 145 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 RAC1P63000 192 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 HYAL4Q2M3T9 481 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 NRN1LQ496H8 165 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF542PQ5EBM4 170 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 ANKRD37Q7Z713 158 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 OR1P1Q8NH06 330 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 FAM216AQ8WUB2 273 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 NRSN2Q9GZP1 204 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 TP53TG5Q9Y2B4 290 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 LHFPL6Q9Y693 200 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 CHCHD2Q9Y6H1 151 aaPredicted RBP3.59□□□□□ -1.84
UBE4A-201ENST00000252108 URGCP-MRPS24S4R325 110 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 LOC400499M0QZD8 3231 aa3.59□□□□□ -1.84
UBE4A-201ENST00000252108 A0A1W2PQM1 296 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ADAM20O43506 726 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SYNGR2O43760 224 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CD99P14209 185 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 EPHA1P21709 976 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 PLPPR5Q32ZL2 321 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 PLAC9Q5JTB6 97 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF66Q6ZN08 573 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SLC25A26Q70HW3 274 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 APOBEC3DQ96AK3 386 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SPACA5Q96QH8 159 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 C2orf88Q9BSF0 95 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 PHF7Q9BWX1 381 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 MCTS1Q9ULC4 181 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 FAM166BA8MTA8 275 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RER1O15258 196 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 MPDU1O75352 247 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF737O75373 536 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 IGHV2-70P01814 119 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 OPRM1P35372 400 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 HTD2P86397 168 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 PMS2P11Q13670 270 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 COTL1Q14019 142 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CYB5R2Q6BCY4 276 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 C12orf54Q6X4T0 127 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 LYZL2Q7Z4W2 148 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 TBC1D26Q86UD7 250 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SLC35G3Q8N808 338 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 OR2M3Q8NG83 312 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms