RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PRAMEF5Q5TYX0 476 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 C7orf50Q9BRJ6 194 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 KAAG1Q9UBP8 84 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 MTFP1Q9UDX5 166 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 FLNBO75369 2602 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 H7C2Y5 167 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 TUSC2O75896 110 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 CD3DP04234 171 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR8U9P0C7N5 309 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 CATR1Q13166 79 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR5AP2Q8NGF4 316 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR8U1Q8NH10 309 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 SNAPC3Q92966 411 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 FOXC2Q99958 501 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 DCTN5Q9BTE1 182 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 HECTD1Q9ULT8 2610 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 HCFC1P51610 2035 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 IGHV2-5P01817 119 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 ANXA3P12429 323 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 C4orf46Q504U0 113 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR13A1Q8NGR1 328 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 NXF2Q9GZY0 626 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 PSG11Q9UQ72 335 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 WNK2Q9Y3S1 2297 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 LDLRAD4O15165 306 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 LYRM1O43325 122 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 ORC5O43913 435 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 GSTT2P0CG29 244 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 CCL3L1P16619 93 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 FPR2P25090 351 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 GIFP27352 417 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 ERP29P30040 261 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 DVL1P1P54792 670 aaPredicted RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 NCR3LG1Q68D85 454 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 TMEM186Q96B77 213 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 MBD6Q96DN6 1003 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 OCEL1Q9H607 264 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 METTL8Q9H825 291 aaKnown RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 GPN1Q9HCN4 374 aaPredicted RBP9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 KCNK7Q9Y2U2 307 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 PRELID3BQ9Y3B1 194 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 MALRD1Q5VYJ5 2156 aa9.25□□□□□ -0.93
TNFAIP3-201ENST00000237289 HLA-DQB1P01920 261 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 SSTR5P35346 364 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 QRFPP83859 136 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 IDO2Q6ZQW0 420 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 TMEM229BQ8NBD8 167 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR1L1Q8NH94 360 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 Q9N2K0 584 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 KBTBD11-OT1A0A1B0GTJ5 212 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 RNF212BA8MTL3 300 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 ARG1P05089 322 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 LMO1P25800 156 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 PLGLAQ15195 96 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 C19orf12Q9NSK7 152 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 A0A0A6YYD4 124 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 HSD17B6O14756 317 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 CFPP27918 469 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 GNRHRP30968 328 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 C11orf91Q3C1V1 193 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 TMEM30BQ3MIR4 351 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF497Q6ZNH5 498 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 C17orf107Q6ZR85 190 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 ABHD12Q8N2K0 398 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 GPX8Q8TED1 209 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 LHX4Q969G2 390 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 C1orf147Q96MC9 270 aaPredicted RBP9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 BEX2Q9BXY8 128 aa9.24□□□□□ -0.93
TNFAIP3-201ENST00000237289 A0A1B0GWJ7 208 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 UPK1BO75841 260 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 APOA2P02652 100 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SCTP09683 121 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 ECI1P42126 302 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 AADACL3Q5VUY0 350 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 MOB3BQ86TA1 216 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 PNKDQ8N490 385 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 ARFGEF3Q5TH69 2177 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 CTDSPLO15194 276 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SLC22A5O76082 557 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 AKR1C4P17516 323 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 GATA3P23771 443 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 PPP1CCP36873 323 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 TMEM200BQ69YZ2 307 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 WFDC11Q8NEX6 87 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR52L2PQ8NGH6 319 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 CLEC7AQ9BXN2 247 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SRRQ9GZT4 340 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 RDH8Q9NYR8 311 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 ELF5Q9UKW6 265 aaPredicted RBP9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 ABCA12Q86UK0 2595 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 A0A1B0GW55 424 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 MEIOCA2RUB1 952 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4L2P0CJ85 424 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4L3P0CJ86 424 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4L4P0CJ87 422 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4L5P0CJ88 424 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4L6P0CJ89 424 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4L7P0CJ90 424 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms