RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 J3KRW8 73 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 PHF1O43189 567 aaPredicted RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 SSSCA1O60232 199 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 GAPDHP04406 335 aaKnown RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF728P0DKX0 622 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 TMEM11P17152 192 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 P2RY1P47900 373 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 CD81P60033 236 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 PCOLCEQ15113 449 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF468Q5VIY5 522 aaPredicted RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF709Q8N972 641 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 LYPD6BQ8NI32 183 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 FAM103A1Q9BTL3 118 aaKnown RBP8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF665Q9H7R5 613 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 LPAR2Q9HBW0 351 aa8.1□□□□□ -1.11
HLA-DOA-201ENST00000229829 TP53I11O14683 189 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 LCATP04180 440 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 EPHA1P21709 976 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 NBL1P41271 181 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 MRPL14Q6P1L8 145 aaKnown RBP8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 CALHM1Q8IU99 346 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 UBALD2Q8IYN6 164 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 LGI3Q8N145 548 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 FBXL14Q8N1E6 418 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 ST6GALNAC3Q8NDV1 305 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR1L6Q8NGR2 347 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 FGFBP3Q8TAT2 258 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 VN1R17PQ8TDU5 208 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 ADGRG7Q96K78 797 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 TP53RKQ96S44 253 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 TXN2Q99757 166 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 NAA60Q9H7X0 242 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 PLEKHA2Q9HB19 425 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 SLC2A9Q9NRM0 540 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 ST8SIA3O43173 380 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 RAB7AP51149 207 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 ARF1P84077 181 aaKnown RBP8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 SAPCD1Q5SSQ6 148 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 DPPA3Q6W0C5 159 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 OR5C1Q8NGR4 320 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 SPTSSAQ969W0 71 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 ALKBH3Q96Q83 286 aaPredicted RBP8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 SMIM7Q9BQ49 75 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 PHF7Q9BWX1 381 aaPredicted RBP8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 NECAP2Q9NVZ3 263 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 METTL15P1P0C7V9 234 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 B4GALT1P15291 398 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 CRYGSP22914 178 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 CHRNB4P30926 498 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 CEACAM8P31997 349 aaPredicted RBP8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF133P52736 654 aaPredicted RBP8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 MRPS11P82912 194 aaKnown RBP8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 FOXL2NBQ6ZUU3 175 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 PCED1AQ9H1Q7 454 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 NAGKQ9UJ70 344 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 SELENOKQ9Y6D0 94 aa8.09□□□□□ -1.11
HLA-DOA-201ENST00000229829 ZNF32P17041 273 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 CHRNA7P36544 502 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF92Q03936 586 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 FAM27BQ5VT28 67 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 Q6ZSR3 168 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 MSI2Q96DH6 328 aaKnown RBP8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 P4HTMQ9NXG6 502 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 WNT16Q9UBV4 365 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 C19orf25Q9UFG5 118 aaPredicted RBP8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 NCKAP5O14513 1909 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 DOCK7Q96N67 2140 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF320A2RRD8 509 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 GRIFINA4D1Z8 144 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 SYNGR3O43761 229 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 UMODP07911 640 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 LIFP15018 202 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 GNB2P62879 340 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 ARL6IP1Q15041 203 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 TDRG1Q3Y452 100 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 TMEM41BQ5BJD5 291 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 YRDCQ86U90 279 aaKnown RBP8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 BORCS8Q96FH0 119 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 BTF3L4Q96K17 158 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 SAMD10Q9BYL1 202 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 ST3GAL6Q9Y274 331 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 KIAA1549Q9HCM3 1950 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 A0A0G2JMM0 328 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 A0A1W2PPB8 328 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 A0A1W2PRS3 328 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 KIR3DP1A8MWS1 328 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 CYB5R3P00387 301 aaPredicted RBP8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 GCGP01275 180 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 IGHEP01854 428 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 TK1P04183 234 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 FAM3BP58499 235 aaPredicted RBP8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 C16orf82Q7Z2V1 217 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 C18orf12Q96KH6 178 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR2J1Q9GZK6 312 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 ARV1Q9H2C2 271 aa8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 PTRH2Q9Y3E5 179 aaKnown RBP8.08□□□□□ -1.12
HLA-DOA-201ENST00000229829 GALR1P47211 349 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 NPBWR2P48146 333 aa8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 EWSR1Q01844 656 aaKnown RBP eCLIP8.07□□□□□ -1.12
HLA-DOA-201ENST00000229829 ICAM4Q14773 271 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms