RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 LIFP15018 202 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 TIGITQ495A1 244 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 LRFN3Q9BTN0 628 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 GPR35Q9HC97 309 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 C5orf63A6NC05 138 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 CXorf65A6NEN9 183 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 DTYMKP23919 212 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 SRD5A2P31213 254 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 GNG10P50151 68 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 RBM11P57052 281 aaKnown RBP11.91□□□□□ -0.5
NFKB1-201ENST00000226574 DHRS7BQ6IAN0 325 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-201ENST00000226574 SIGLECL1Q8N7X8 197 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 OR10A7Q8NGE5 316 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 OR2T10Q8NGZ9 312 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 S1PR3Q99500 378 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-201ENST00000226574 ZNF391Q9UJN7 358 aa11.91□□□□□ -0.5
NFKB1-201ENST00000226574 IGKV1-9A0A0C4DH69 117 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 SPRY3O43610 288 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 GAPDHP04406 335 aaKnown RBP11.9□□□□□ -0.5
NFKB1-201ENST00000226574 FAM27BQ5VT28 67 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 OR2Z1Q8NG97 314 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 ZNF331Q9NQX6 463 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-201ENST00000226574 IGHEP01854 428 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 SELEP16581 610 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 C22orf15Q8WYQ4 148 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 TMEM230Q96A57 120 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 ARRDC1-AS1Q9H2J1 176 aa11.9□□□□□ -0.5
NFKB1-201ENST00000226574 HSBP1L1C9JCN9 74 aa11.9□□□□□ -0.51
NFKB1-201ENST00000226574 COL13A1Q5TAT6 717 aaPredicted RBP11.9□□□□□ -0.51
NFKB1-201ENST00000226574 WDR90Q96KV7 1748 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 CDC34P49427 236 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-201ENST00000226574 AESQ08117 197 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 HABP2Q14520 560 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-201ENST00000226574 C21orf62-AS1Q17RA5 79 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 MRPL30Q8TCC3 161 aaKnown RBP11.89□□□□□ -0.51
NFKB1-201ENST00000226574 FER1L6-AS2Q96M78 137 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 PARD6AQ9NPB6 346 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 KIAA1456Q9P272 454 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 NAT8BQ9UHF3 227 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 A0A1W2PPE3 182 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 TNFSF15O95150 251 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 OR10J4P0C629 311 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 PRF1P14222 555 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 CEBPDP49716 269 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-201ENST00000226574 NUFIP2Q7Z417 695 aaKnown RBP11.89□□□□□ -0.51
NFKB1-201ENST00000226574 Q9N2K0 584 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 GSN-AS1Q9NRJ2 163 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
NFKB1-201ENST00000226574 A0A0A6YYD4 124 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 C11orf94C9JXX5 98 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 IL2RAP01589 272 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 APOA2P02652 100 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-201ENST00000226574 F2RP25116 425 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 MDH2P40926 338 aaKnown RBP11.88□□□□□ -0.51
NFKB1-201ENST00000226574 TMEM211Q6ICI0 200 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 WDR74Q6RFH5 385 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-201ENST00000226574 OR10S1Q8NGN2 331 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 MAFAQ8NHW3 353 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF524Q96C55 264 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 IL36RNQ9UBH0 155 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 OR2W1Q9Y3N9 320 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 HELZP42694 1942 aaKnown RBP11.88□□□□□ -0.51
NFKB1-201ENST00000226574 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 A0A0U1RQV5 110 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 FCN1O00602 326 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 ACAA1P09110 424 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-201ENST00000226574 DANCRP0C864 163 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 CALHM1Q8IU99 346 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 LYG1Q8N1E2 194 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 TMEM178AQ8NBL3 297 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 Q96M66 194 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 PAM16Q9Y3D7 125 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 LRRK1Q38SD2 2015 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 A0A1W2PQM1 296 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 MBP02144 154 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 ARL3P36405 182 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 PMELP40967 661 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 THBS3P49746 956 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 FHL1Q13642 323 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 IL11RAQ14626 422 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 ABHD14BQ96IU4 210 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 PCGF1Q9BSM1 259 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 TMEM222Q9H0R3 208 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 DYNLRB1Q9NP97 96 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 RPRMQ9NS64 109 aa11.88□□□□□ -0.51
NFKB1-201ENST00000226574 TMEM30CPA0ZSE6 113 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 EIF3IQ13347 325 aaKnown RBP11.87□□□□□ -0.51
NFKB1-201ENST00000226574 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF818PQ6ZRF7 136 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 OR2J1Q9GZK6 312 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 VAX2Q9UIW0 290 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 AGFG2O95081 481 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms