RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ADAM20O43506 726 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 GNG3P63215 75 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 S100A12P80511 92 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 HERPUD1Q15011 391 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 OR2G3Q8NGZ4 309 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 LILRB1Q8NHL6 650 aaPredicted RBP21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 CABLES2Q9BTV7 478 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 PRRG4Q9BZD6 226 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 TREM2Q9NZC2 230 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 A0A1B0GU03 582 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 AQP7O14520 342 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 WISP2O76076 250 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 CCNOP22674 350 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 ATP6V0CP27449 155 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 POLR2GP62487 172 aaKnown RBP eCLIP21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 CLINT1Q14677 625 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 TMEM182Q6ZP80 229 aaPredicted RBP21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 MOB1BQ7L9L4 216 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 FAM213BQ8TBF2 198 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 MRPL30Q8TCC3 161 aaKnown RBP21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 NEK7Q8TDX7 302 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 CLCC1Q96S66 551 aa21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 PARP12Q9H0J9 701 aaKnown RBP21.2■□□□□ 0.98
RUNDC3A-201ENST00000225441 PTPRQQ9UMZ3 2332 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 ZNF407Q9C0G0 2248 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 A0A096LPE4 126 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 A0A1W2PPZ6 126 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 MAS1LP35410 378 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 MDH2P40926 338 aaKnown RBP21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 AKR1D1P51857 326 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 SUMF2Q8NBJ7 301 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 MALSU1Q96EH3 234 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 KIAA1456Q9P272 454 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 OR2W1Q9Y3N9 320 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 MGAQ8IWI9 3026 aa21.19■□□□□ 0.98
RUNDC3A-201ENST00000225441 DEGS1O15121 323 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 PGLYRP1O75594 196 aaPredicted RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 DFFBO76075 338 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 HOXB1P14653 301 aaPredicted RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 ZNF44P15621 663 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 APLNRP35414 380 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 HABP2Q14520 560 aaPredicted RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 PCSK4Q6UW60 755 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 SFT2D1Q8WV19 159 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 NANOS1Q8WY41 292 aaKnown RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 GP6Q9HCN6 339 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 CRYABP02511 175 aaKnown RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 FAM87AP0C7U9 286 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 F2RP25116 425 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 RAB2AP61019 212 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 HLA-DRB3P79483 266 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 MCEMP1Q8IX19 187 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 H1FOOQ8IZA3 346 aaPredicted RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 PLPPR1Q8TBJ4 325 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 ESRP2Q9H6T0 727 aaKnown RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 ZNF71Q9NQZ8 489 aaPredicted RBP21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 CCL28Q9NRJ3 127 aa21.18■□□□□ 0.98
RUNDC3A-201ENST00000225441 LAMA5O15230 3695 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 SHANK1Q9Y566 2161 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 IGKV1D-13A0A0B4J2D9 117 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 IGKV1-6A0A0C4DH72 117 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 WRBO00258 174 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 SSSCA1O60232 199 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 IGKV1-13P0DP09 117 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 AGAP20933 346 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 RPL35P42766 123 aaKnown RBP21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 FHITP49789 147 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 ZNF324BQ6AW86 544 aaPredicted RBP21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 SP5Q6BEB4 398 aaPredicted RBP21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 FAM58AQ8N1B3 248 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 RAB40CQ96S21 281 aa21.17■□□□□ 0.98
RUNDC3A-201ENST00000225441 M0R036 132 aa21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 HBE1P02100 147 aa21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 SNRNP70P08621 437 aaKnown RBP21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 CXorf66Q5JRM2 361 aaPredicted RBP21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 Q8IYB0 196 aa21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 OR10J5Q8NHC4 309 aa21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 SARAFQ96BY9 339 aa21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 RBMXL1Q96E39 390 aaKnown RBP21.16■□□□□ 0.98
RUNDC3A-201ENST00000225441 RBFOX3A6NFN3 312 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 TSC22D1Q15714 1073 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 SOHLH1Q5JUK2 328 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 LSM10Q969L4 123 aaKnown RBP21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 ATP5SQ99766 215 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 RNF115Q9Y4L5 304 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 HSD17B6O14756 317 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 SYNGR1O43759 233 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 C1QL1O75973 258 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 S100A8P05109 93 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 RPL23AP62750 156 aaKnown RBP21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 HIKESHIQ53FT3 197 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 OR5C1Q8NGR4 320 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 CRIM1Q9NZV1 1036 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 DNAJC13O75165 2243 aa21.15■□□□□ 0.98
RUNDC3A-201ENST00000225441 J3QT63 122 aa21.14■□□□□ 0.97
RUNDC3A-201ENST00000225441 CD200P41217 278 aa21.14■□□□□ 0.97
RUNDC3A-201ENST00000225441 MEOX2P50222 304 aa21.14■□□□□ 0.97
RUNDC3A-201ENST00000225441 TLE4Q04727 773 aa21.14■□□□□ 0.97
RUNDC3A-201ENST00000225441 HS3ST6Q96QI5 342 aa21.14■□□□□ 0.97
RUNDC3A-201ENST00000225441 C12orf57Q99622 126 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms