RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MGST3O14880 152 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 TCAPO15273 167 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 CD200P41217 278 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 LOXL3P58215 753 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 FAM27E3Q08E93 113 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 ZXDCQ2QGD7 858 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-201ENST00000223398 SHISA5Q8N114 240 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 OR2H2O95918 312 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 CYB5R1Q9UHQ9 305 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 VSIG4Q9Y279 399 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 EP300Q09472 2414 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-201ENST00000223398 LMX1BO60663 402 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 PF4V1P10720 104 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 TMEM91Q6ZNR0 172 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 SFTA3P0C7M3 94 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 TMEM33P57088 247 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 LYZL2Q7Z4W2 148 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 LINC00596Q86U02 117 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 ADAD2Q8NCV1 583 aaKnown RBP15.98■□□□□ 0.15
CLIP2-201ENST00000223398 KLF14Q8TD94 323 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-201ENST00000223398 FAM222BQ8WU58 562 aa15.98■□□□□ 0.15
CLIP2-201ENST00000223398 HBZP02008 142 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 PRSS54Q6PEW0 395 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 C1orf174Q8IYL3 243 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 BVESQ8NE79 360 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 UFC1Q9Y3C8 167 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 ZNF318Q5VUA4 2279 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 LOC102723971A0A1B0GUV8 181 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 NKX2-6A6NCS4 301 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 CA11O75493 328 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 OR4X1Q8NH49 305 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 ZDHHC8Q9ULC8 765 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 A0A0U1RQV5 110 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 RNASEK-C17orf49H0YIS7 233 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 J3QR06 171 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 RAB29O14966 203 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 FAM78BQ5VT40 261 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 VWA1Q6PCB0 445 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 OR8G5Q8NG78 346 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 SMPD2O60906 423 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 DAOP14920 347 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 VDAC1P21796 283 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 LIMS1P48059 325 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 MUC15Q8N387 334 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 OR4P4Q8NGL7 312 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 OR1L8Q8NGR8 309 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 S100A8P05109 93 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 SNRPCP09234 159 aaKnown RBP15.97■□□□□ 0.15
CLIP2-201ENST00000223398 OR51B2Q9Y5P1 312 aa15.97■□□□□ 0.15
CLIP2-201ENST00000223398 MPV17P39210 176 aa15.96■□□□□ 0.15
CLIP2-201ENST00000223398 IGSF11Q5DX21 431 aa15.96■□□□□ 0.15
CLIP2-201ENST00000223398 SUCLG1P53597 346 aaKnown RBP15.96■□□□□ 0.15
CLIP2-201ENST00000223398 FA2HQ7L5A8 372 aa15.96■□□□□ 0.15
CLIP2-201ENST00000223398 TCTE3Q8IZS6 198 aa15.96■□□□□ 0.15
CLIP2-201ENST00000223398 WSB1Q9Y6I7 421 aa15.96■□□□□ 0.15
CLIP2-201ENST00000223398 INHBBP09529 407 aa15.96■□□□□ 0.14
CLIP2-201ENST00000223398 PSG5Q15238 335 aa15.96■□□□□ 0.14
CLIP2-201ENST00000223398 ATP6V1FQ16864 119 aa15.96■□□□□ 0.14
CLIP2-201ENST00000223398 PERPQ96FX8 193 aa15.96■□□□□ 0.14
CLIP2-201ENST00000223398 GUCD1Q96NT3 240 aa15.96■□□□□ 0.14
CLIP2-201ENST00000223398 LHFPL6Q9Y693 200 aa15.96■□□□□ 0.14
CLIP2-201ENST00000223398 SPTBP11277 2137 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 GAPDHP04406 335 aaKnown RBP15.95■□□□□ 0.14
CLIP2-201ENST00000223398 ACSF3Q4G176 576 aaPredicted RBP15.95■□□□□ 0.14
CLIP2-201ENST00000223398 CTHRC1Q96CG8 243 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 A0A0G2JMM0 328 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 A0A1W2PPB8 328 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 A0A1W2PRS3 328 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 KIR3DP1A8MWS1 328 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 APCDD1LQ8NCL9 501 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 LILRB1Q8NHL6 650 aaPredicted RBP15.95■□□□□ 0.14
CLIP2-201ENST00000223398 SURF2Q15527 256 aaPredicted RBP15.95■□□□□ 0.14
CLIP2-201ENST00000223398 GUCA2BQ16661 112 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 SLC24A4Q8NFF2 622 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 LEAP2Q969E1 77 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 Q9N2K0 584 aa15.95■□□□□ 0.14
CLIP2-201ENST00000223398 GCM2O75603 506 aaPredicted RBP15.94■□□□□ 0.14
CLIP2-201ENST00000223398 FAM106CPP0CH98 169 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 IL24Q13007 206 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 RBM14Q96PK6 669 aaKnown RBP15.94■□□□□ 0.14
CLIP2-201ENST00000223398 IGLV1-36A0A0B4J1U3 117 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 IGKV3-11P04433 115 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 RPS4Y1P22090 263 aaKnown RBP15.94■□□□□ 0.14
CLIP2-201ENST00000223398 LY6DQ14210 128 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 STARD4Q96DR4 205 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 PPIAL4CA0A0B4J2A2 164 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 A0A1W2PNV4 684 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 RECKO95980 971 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 FCGR3AP08637 254 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 PPIAL4GP0DN37 164 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 MMP24Q9Y5R2 645 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 TMEM229AB2RXF0 380 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 FGF12P61328 243 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 PAFAH1B2P68402 229 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 OR4D10Q8NGI6 311 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 ZNF703Q9H7S9 590 aaPredicted RBP15.94■□□□□ 0.14
CLIP2-201ENST00000223398 TECRQ9NZ01 308 aaKnown RBP15.94■□□□□ 0.14
CLIP2-201ENST00000223398 GATCO43716 136 aaKnown RBP15.94■□□□□ 0.14
CLIP2-201ENST00000223398 NPY1RP25929 384 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 TEX261Q6UWH6 196 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms