RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 HFEQ30201 348 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 S1PR3Q99500 378 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 TPPP3Q9BW30 176 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 MS4A7Q9GZW8 240 aaPredicted RBP8.17□□□□□ -1.1
CCDC113-201ENST00000219299 LHFPL6Q9Y693 200 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 ADAMTS9Q9P2N4 1935 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PHF3Q92576 2039 aaKnown RBP8.17□□□□□ -1.1
CCDC113-201ENST00000219299 CTAG2O75638 210 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PTHLHP12272 177 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 CD200P41217 278 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 RAB32Q13637 225 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF79Q15937 498 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 ACSF3Q4G176 576 aaPredicted RBP8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PRAMEF5Q5TYX0 476 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PRAMEF6Q5VXH4 476 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PET117Q6UWS5 81 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 C9orf106Q8NAJ2 232 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 OPN4Q9UHM6 478 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 PPP1R3CQ9UQK1 317 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 HEATR5AQ86XA9 2040 aa8.17□□□□□ -1.1
CCDC113-201ENST00000219299 CDIPTO14735 213 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 NPIPB7O75200 414 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 USF1P22415 310 aaPredicted RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 HLA-DRB3P79483 266 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF273Q14593 569 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 SLC25A53Q5H9E4 307 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 Q6ZT83 130 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 OR1K1Q8NGR3 316 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 UBALD1Q8TB05 177 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 BET1LQ9NYM9 111 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 TMED3Q9Y3Q3 217 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 MPC1Q9Y5U8 109 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 C7orf66A4D0T2 115 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 IAPPP10997 89 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 NAT2P11245 290 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 SLC25A4P12235 298 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 LRRC29Q8WV35 223 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF837Q96EG3 531 aaPredicted RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 MRPS18AQ9NVS2 196 aaKnown RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 MRPS18CQ9Y3D5 142 aaKnown RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 K7ENP7 123 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 HNF1AP20823 631 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 LINC01590Q5TEZ4 76 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 TMEM65Q6PI78 240 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 EDARADDQ8WWZ3 215 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 MARVELD3Q96A59 401 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 SHARPINQ9H0F6 387 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 SIRT4Q9Y6E7 314 aaPredicted RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 LAMA2P24043 3122 aaKnown RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 IGKV1D-43A0A0B4J1Z2 117 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 TMEM272A0A1B0GTI8 110 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 CDK2AP1O14519 115 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 PLAC9Q5JTB6 97 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 PACRGQ96M98 296 aaPredicted RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 TMPRSS13Q9BYE2 586 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 CHST6Q9GZX3 395 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 MYOZ1Q9NP98 299 aaPredicted RBP8.16□□□□□ -1.1
CCDC113-201ENST00000219299 C7orf77A4D0Y5 90 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 OR5B21A6NL26 309 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 DVL1O14640 695 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 ST8SIA5O15466 376 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 TTRP02766 147 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 CRHP06850 196 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 UCP2P55851 309 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 CCL8P80075 99 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 OR10X1Q8NGY0 326 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 LINC01560Q8TB33 94 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 SLC35E1Q96K37 410 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 RAB1BQ9H0U4 201 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 MS4A5Q9H3V2 200 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 CNTD2Q9H8S5 307 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 SPRR3Q9UBC9 169 aa8.16□□□□□ -1.1
CCDC113-201ENST00000219299 CST7O76096 145 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 CNIH1O95406 144 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 SLC25A6P12236 298 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 DEFA4P12838 97 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 GPR12P47775 334 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 OR3A4PP47883 348 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 IFITM2Q01629 132 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 IL13RA2Q14627 380 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 LILRB1Q8NHL6 650 aaPredicted RBP8.15□□□□□ -1.1
CCDC113-201ENST00000219299 FBXL17Q9UF56 701 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 TRAV8-7A0A075B6U6 113 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 A1L4Q6 167 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 NPIPB13A6NJU9 1138 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 OR5H1A6NKK0 313 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 B4DEV8 164 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 NPIPB4C9JG80 1138 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 ERVH48-1M5A8F1 160 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 HPXP02790 462 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 ZNF25P17030 456 aaPredicted RBP8.15□□□□□ -1.1
CCDC113-201ENST00000219299 PMCHP20382 165 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 SLC36A1Q7Z2H8 476 aa8.15□□□□□ -1.1
CCDC113-201ENST00000219299 MDS2Q8NDY4 140 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms