RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DHHO43323 396 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 SGMS2Q8NHU3 365 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 PRELID3AQ96N28 172 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 RBKSQ9H477 322 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 C1QTNF9BB2RNN3 333 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 ABHD14BQ96IU4 210 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 A0A1B0GU03 582 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 ARRDC5A6NEK1 342 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 LRRC75BQ2VPJ9 315 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 HCSTQ9UBK5 93 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 SCN4AP35499 1836 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 ABLIM3O94929 683 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 PGLYRP4Q96LB8 373 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 HIGD1AQ9Y241 93 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 SNRPCP09234 159 aaKnown RBP12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 FAM3BP58499 235 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 RAC3P60763 192 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 WIPI1Q5MNZ9 446 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 ZNF576Q9H609 170 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 SOD3P08294 240 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 INSL4Q14641 139 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 C10orf128Q5T292 105 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 PRSS54Q6PEW0 395 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 OR10D3Q8NH80 312 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 HMX2A2RU54 273 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 PSMB11A5LHX3 300 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 KIRREL2Q6UWL6 708 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 MRGPRFQ96AM1 343 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 C6orf106Q9H6K1 298 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 FCMRO60667 390 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 NUBP1P53384 320 aa12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 FGF20Q9NP95 211 aaPredicted RBP12.92□□□□□ -0.34
SPTLC2-201ENST00000216484 LDLRAD4O15165 306 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 WDR38Q5JTN6 314 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 GMPPAQ96IJ6 420 aaPredicted RBP12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 SMOC1Q9H4F8 434 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 HYAL1Q12794 435 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 TMEM70Q9BUB7 260 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 DOCK4Q8N1I0 1966 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 HMSDA8MTL9 139 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 MOSPD3O75425 235 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 C2orf88Q9BSF0 95 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 PARP11Q9NR21 331 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 UQCR10Q9UDW1 63 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 PTPRDP23468 1912 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 STXBP6Q8NFX7 210 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 RAB33BQ9H082 229 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 CDC42EP3Q9UKI2 254 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 LEUTXA8MZ59 168 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 UPK1AO00322 258 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 MRPS11P82912 194 aaKnown RBP12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 MRGPRGQ86SM5 289 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 TRAV21A0A0B4J279 112 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 A0A1B0GV90 55 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 P2RY1P47900 373 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 OR5A1Q8NGJ0 315 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 LINC00470Q9BZP3 86 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 AKIP1Q9NQ31 210 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 STARD10Q9Y365 291 aa12.91□□□□□ -0.34
SPTLC2-201ENST00000216484 LEPROTL1O95214 131 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 CCL7P80098 99 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 MPLP40238 635 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 FMODQ06828 376 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 ZNF385CQ66K41 422 aaPredicted RBP12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 HOXA6P31267 233 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 PDCD6O75340 191 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 MGAT2Q10469 447 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 OR10AC1Q8NH08 325 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 TSPAN32Q96QS1 320 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 METTL12A8MUP2 240 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 A8MWL6 223 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 FAM74A4Q5TZK3 123 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 OR4A5Q8NH83 315 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 IL19Q9UHD0 177 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 HAX1O00165 279 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 SPINK2P20155 84 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 ZNF56Q15929 161 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 ATOH7Q8N100 152 aa12.9□□□□□ -0.34
SPTLC2-201ENST00000216484 LINC01387J3KSC0 135 aa12.9□□□□□ -0.35
SPTLC2-201ENST00000216484 FFAR1O14842 300 aa12.9□□□□□ -0.35
SPTLC2-201ENST00000216484 ZNF32P17041 273 aa12.9□□□□□ -0.35
SPTLC2-201ENST00000216484 PCGF1Q9BSM1 259 aa12.9□□□□□ -0.35
SPTLC2-201ENST00000216484 MTFP1Q9UDX5 166 aa12.9□□□□□ -0.35
SPTLC2-201ENST00000216484 COL1A1P02452 1464 aaPredicted RBP12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 TMEM160Q9NX00 188 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 C5P01031 1676 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 NAT2P11245 290 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 NPFFO15130 113 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 OR51B2Q9Y5P1 312 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 PABPC1L2AQ5JQF8 200 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 MBNL2Q5VZF2 373 aaKnown RBP12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 NSUN5P2Q63ZY6 315 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 FAM109BQ6ICB4 259 aaPredicted RBP12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 PTPMT1Q8WUK0 201 aaPredicted RBP12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 TMEM52BQ4KMG9 183 aa12.89□□□□□ -0.35
SPTLC2-201ENST00000216484 ZNF71Q9NQZ8 489 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms