RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 ECI1P42126 302 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 ZNF841Q6ZN19 808 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 MARVELD3Q96A59 401 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 SCGB3A2Q96PL1 93 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 SLC23A1Q9UHI7 598 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 GPR132Q9UNW8 380 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 TUSC2O75896 110 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 ANXA7P20073 488 aaKnown RBP13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 AADACP22760 399 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 RPL31P62899 125 aaKnown RBP13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 SURF2Q15527 256 aaPredicted RBP13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 NLRC3Q7RTR2 1065 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 TCF23Q7RTU1 214 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 H1FOOQ8IZA3 346 aaPredicted RBP13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 OR8B3Q8NGG8 313 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 MOB3AQ96BX8 217 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 OR8B2Q96RD0 313 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 BARX1Q9HBU1 254 aaPredicted RBP13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 OR1A1Q9P1Q5 309 aa13.2□□□□□ -0.3
SNRPD3-201ENST00000215829 GPR37O15354 613 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 PPYP01298 95 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 ZBTB25P24278 435 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 FPR2P25090 351 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 PDLIM4P50479 330 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 ATP5J2P56134 94 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 HTD2P86397 168 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 RFESDQ8TAC1 157 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 BEX2Q9BXY8 128 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 ALX4Q9H161 411 aaPredicted RBP13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 BEX1Q9HBH7 125 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 C19orf12Q9NSK7 152 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 CALYQ9NYX4 217 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 LPAR3Q9UBY5 353 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 UBE2J1Q9Y385 318 aaPredicted RBP13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 LINC00312Q9Y6C7 94 aa13.19□□□□□ -0.3
SNRPD3-201ENST00000215829 KBTBD11-OT1A0A1B0GTJ5 212 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 HSPA12AO43301 675 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 PRAF2O60831 178 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 CEACAM6P40199 344 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 KRTAP10-9P60411 292 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 HERV-K104P61576 105 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 C17orf58Q2M2W7 97 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 H1FXQ92522 213 aaKnown RBP13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 TOLLIPQ9H0E2 274 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 LINC00574Q9H8X3 128 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 RAB9BQ9NP90 201 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 TAS2R3Q9NYW6 316 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 CLN8Q9UBY8 286 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 ZNF69Q9UC07 566 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 ALG5Q9Y673 324 aa13.18□□□□□ -0.3
SNRPD3-201ENST00000215829 FAM172BPA6NC97 362 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 ZNF729A6NN14 1252 aaPredicted RBP13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 IL5P05113 134 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 VSIG10L2P0DP72 767 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 PGAM2P15259 253 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 UCP3P55916 312 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 FXYD4P59646 89 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 BAMBIQ13145 260 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 CADM3Q8N126 398 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 OR52L2PQ8NGH6 319 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 RTBDNQ9BSG5 229 aaPredicted RBP13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 GSX2Q9BZM3 304 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 FXYD6Q9H0Q3 95 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 C5orf66Q9H5L9 145 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 OR2W1Q9Y3N9 320 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 TRBV23-1A0A0A0MS06 115 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 A0A0A6YYJ9 748 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 F5H0A9 414 aaPredicted RBP13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 F2RL2O00254 374 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 ZNF728P0DKX0 622 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 BCAP31P51572 246 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 ZNF273Q14593 569 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 WDR25Q64LD2 544 aaPredicted RBP13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 GLDNQ6ZMI3 551 aaPredicted RBP13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 ZFAND1Q8TCF1 268 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 TOMM40LQ969M1 308 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 BPESC1Q9GZL8 116 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 NARFLQ9H6Q4 476 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 OR2S2Q9NQN1 319 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 RDH8Q9NYR8 311 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 DOCK11Q5JSL3 2073 aa13.17□□□□□ -0.3
SNRPD3-201ENST00000215829 TACC2O95359 2948 aa13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 C7orf66A4D0T2 115 aa13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 LPCAT3Q6P1A2 487 aa13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 ADAD2Q8NCV1 583 aaKnown RBP13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 NINJ1Q92982 152 aa13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 PERPQ96FX8 193 aa13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 GHITMQ9H3K2 345 aa13.16□□□□□ -0.3
SNRPD3-201ENST00000215829 SPG11Q96JI7 2443 aa13.15□□□□□ -0.3
SNRPD3-201ENST00000215829 FBN2P35556 2912 aa13.15□□□□□ -0.3
SNRPD3-201ENST00000215829 CELSR2Q9HCU4 2923 aa13.15□□□□□ -0.3
SNRPD3-201ENST00000215829 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.3
SNRPD3-201ENST00000215829 NDUFS8O00217 210 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms