RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 CDX2Q99626 313 aaPredicted RBP16.89■□□□□ 0.29
HOXA11-201ENST00000006015 RSG1Q9BU20 258 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 SDK2Q58EX2 2172 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 IGKV1-12A0A0C4DH73 117 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 MARCH11A6NNE9 402 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 PATE3B3GLJ2 98 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 IGKV1D-12P01611 117 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 MBP02144 154 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 CFIP05156 583 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 FGF5P12034 268 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 ERVS71-1P61550 626 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM241Q24JQ0 296 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 ACTL10Q5JWF8 245 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 PRAMEF20Q5VT98 475 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 CYB5R2Q6BCY4 276 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 CENPVQ7Z7K6 275 aaPredicted RBP16.89■□□□□ 0.29
HOXA11-201ENST00000006015 NECAP1Q8NC96 275 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 NAT6Q93015 286 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 ZNF442Q9H7R0 627 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 CBLN4Q9NTU7 201 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 PLEK2Q9NYT0 353 aa16.89■□□□□ 0.29
HOXA11-201ENST00000006015 IGLV3-32A0A0A0MS00 114 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 B4E171 279 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 ZNF25P17030 456 aaPredicted RBP16.88■□□□□ 0.29
HOXA11-201ENST00000006015 GZMHP20718 246 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 TSPAN7P41732 249 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 RSPO4Q2I0M5 234 aaPredicted RBP16.88■□□□□ 0.29
HOXA11-201ENST00000006015 BSXQ3C1V8 233 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 TEX38Q6PEX7 206 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 ZNF818PQ6ZRF7 136 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 OR5D13Q8NGL4 314 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 TAAR3PQ9P1P4 343 aa16.88■□□□□ 0.29
HOXA11-201ENST00000006015 KIR2DL5BA0A0G2JN68 375 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 KIR2DL5BA0A0G2JPC4 375 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 HRASP01112 189 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 C1orf194Q5T5A4 169 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 KIR2DL5AQ8N109 375 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 GAPTQ8N292 157 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 OR2AE1Q8NHA4 323 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 RBKSQ9H477 322 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 VSIRQ9H7M9 311 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 PILRBQ9UKJ0 227 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM210A6NLX4 147 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 ZFAND5O76080 213 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 KBTBD11O94819 623 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 MDH2P40926 338 aaKnown RBP16.87■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM267Q0VDI3 215 aaPredicted RBP16.87■□□□□ 0.29
HOXA11-201ENST00000006015 DCAF10Q5QP82 559 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 SSX7Q7RTT5 188 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 RAB40CQ96S21 281 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 CBY1Q9Y3M2 126 aa16.87■□□□□ 0.29
HOXA11-201ENST00000006015 RBM11P57052 281 aaKnown RBP16.86■□□□□ 0.29
HOXA11-201ENST00000006015 SERF2P84101 59 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 RNPS1Q15287 305 aaKnown RBP16.86■□□□□ 0.29
HOXA11-201ENST00000006015 Q6ZS49 121 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 MRPL52Q86TS9 123 aaKnown RBP16.86■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM54Q969K7 222 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 RASL10BQ96S79 203 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 EML6Q6ZMW3 1958 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 MAP1LC3B2A6NCE7 125 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 H0Y980 276 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 H3BP45 60 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 M0QZK8 103 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 GGCTO75223 188 aaKnown RBP16.86■□□□□ 0.29
HOXA11-201ENST00000006015 CRYABP02511 175 aaKnown RBP16.86■□□□□ 0.29
HOXA11-201ENST00000006015 PHYHD1Q5SRE7 291 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 PMS2CLQ68D20 193 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 IFI44Q8TCB0 444 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 PCGF1Q9BSM1 259 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 DEFB126Q9BYW3 111 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 MAP1LC3BQ9GZQ8 125 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 FUT9Q9Y231 359 aa16.86■□□□□ 0.29
HOXA11-201ENST00000006015 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 RTTNQ86VV8 2226 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM265A0A087WTH1 108 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 RPL23P62829 140 aaKnown RBP16.85■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM41BQ5BJD5 291 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 GBGT1Q8N5D6 347 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 FKBP11Q9NYL4 201 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 ZNF737O75373 536 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 TYMSP04818 313 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 MMP7P09237 267 aaPredicted RBP16.85■□□□□ 0.29
HOXA11-201ENST00000006015 HERPUD1Q15011 391 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 ZNF295-AS1Q8N0V1 137 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM37Q8WXS4 190 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 PINX1Q96BK5 328 aaKnown RBP16.85■□□□□ 0.29
HOXA11-201ENST00000006015 OR51I2Q9H344 312 aa16.85■□□□□ 0.29
HOXA11-201ENST00000006015 A0A1W2PPQ1 181 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 DLEU1O43261 78 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 NRASP01111 189 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 SLC25A6P12236 298 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 CCL4P13236 92 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 MEF2BQ02080 365 aaPredicted RBP16.84■□□□□ 0.29
HOXA11-201ENST00000006015 TMEM42Q69YG0 159 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 CISD2Q8N5K1 135 aaKnown RBP16.84■□□□□ 0.29
HOXA11-201ENST00000006015 ANAPC16Q96DE5 110 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 COLQQ9Y215 455 aaPredicted RBP16.84■□□□□ 0.29
HOXA11-201ENST00000006015 PIGBOS1A0A0B4J2F0 54 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 SLC22A20A6NK97 555 aa16.84■□□□□ 0.29
HOXA11-201ENST00000006015 DHHO43323 396 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms