RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 LINC00116Q8NCU8 138 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 OR5P2Q8WZ92 322 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 SCARF2Q96GP6 870 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ADTRPQ96IZ2 230 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 MARCH2Q9P0N8 246 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 FGF16O43320 207 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 SYNGR1O43759 233 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 CTSBP07858 339 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 PIRTP0C851 137 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 MTCP1P56278 107 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 DPPA3Q6W0C5 159 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 DTX1Q86Y01 620 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 MUCL1Q96DR8 90 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 DEFB129Q9H1M3 183 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 IFI27L2Q9H2X8 130 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 TMEM242Q9NWH2 141 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 RIIAD1A6NNX1 92 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF354AO60765 605 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 C1QL1O75973 258 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 TTRP02766 147 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ELOBQ15370 118 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 CALHM3Q86XJ0 350 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 OR51E1Q8TCB6 317 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 DOK4Q8TEW6 326 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 GNG12Q9UBI6 72 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 BRCA1P38398 1863 aaKnown RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 COL14A1Q05707 1796 aaKnown RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 PCSK5Q92824 1860 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 SLIT3O75094 1523 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 C17orf112F2Z3M2 114 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 HSPB6O14558 160 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 CLDN7O95471 211 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 HIST1H1DP16402 221 aaKnown RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF93P35789 620 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 CRISP3P54108 245 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 GAGE2BQ13066 116 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ACSF3Q4G176 576 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 GAGE2EQ4V326 116 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 OR4C13Q8NGP0 309 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 OR2K2Q8NGT1 345 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ZG16BQ96DA0 208 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ZBTB45Q96K62 511 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 WDR61Q9GZS3 305 aaKnown RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 GAGE2DQ9UEU5 116 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 A0A1B0GUS0 222 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 SPAARA0A1B0GVQ0 90 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 H0YIG0 161 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 K7EP34 96 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 CRXO43186 299 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 CRYBB2P43320 205 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 GLIPR1P48060 266 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 RPL8P62917 257 aaKnown RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 COL9A3Q14050 684 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 TXNDC8Q6A555 127 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 ACVR1CQ8NER5 493 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 OR5AU1Q8NGC0 362 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 C16orf52Q8NHV5 167 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 BAALCQ8WXS3 180 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 APOBEC3DQ96AK3 386 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-209ENST00000639244 MAGIXQ9H6Y5 334 aa3.76□□□□□ -1.81
SCN3A-209ENST00000639244 NOTCH4Q99466 2003 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCN3A-209ENST00000639244 ASPDHA6ND91 283 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 FAM157BP0CG42 384 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 FCARP24071 287 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 ZNF77Q15935 545 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 CLEC14AQ86T13 490 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 TGIF2LYQ8IUE0 185 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SPNS2Q8IVW8 549 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 COX18Q8N8Q8 333 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SLC38A5Q8WUX1 472 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 WNT2BQ93097 391 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 TVP23CQ96ET8 276 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 IP6K3Q96PC2 410 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 HIST1H2AAQ96QV6 131 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SH2D2AQ9NP31 389 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 MED31Q9Y3C7 131 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 TAAR5O14804 337 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SP1P08047 785 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 IFITM1P13164 125 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 ELK1P19419 428 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 AVPR1BP47901 424 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 FOXA1P55317 472 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 RPL31P62899 125 aaKnown RBP3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SPHARQ15513 63 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SPRYD7Q5W111 196 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 PLPPR1Q8TBJ4 325 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SCGB1C1Q8TD33 95 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 NEU4Q8WWR8 484 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-209ENST00000639244 LINC01599Q8WXQ3 324 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 RNF39Q9H2S5 420 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 ST20Q9HBF5 79 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SPTBN2O15020 2390 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 UBR2Q8IWV8 1755 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 A0A1W2PP55 124 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 DUXBA0A1W2PPF3 345 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 ODAMA1E959 279 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 SERINC4A6NH21 518 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 C9JAW5 83 aa3.75□□□□□ -1.81
SCN3A-209ENST00000639244 B3GALT4O96024 378 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms