RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HIST1H1BP16401 226 aaKnown RBP9.34□□□□□ -0.91
SNIP1-204ENST00000638725 MDKP21741 143 aaPredicted RBP9.34□□□□□ -0.91
SNIP1-204ENST00000638725 GPM6AP51674 278 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
SNIP1-204ENST00000638725 GAMTQ14353 236 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 RPS19BP1Q86WX3 136 aaKnown RBP9.34□□□□□ -0.91
SNIP1-204ENST00000638725 C1orf87Q8N0U7 546 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 OR13D1Q8NGV5 346 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 OR51H1Q8NH63 302 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 S100PBPQ96BU1 408 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 GPR146Q96CH1 333 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 SSX3Q99909 188 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 GPR35Q9HC97 309 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 RPRMQ9NS64 109 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 GFOD1Q9NXC2 390 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 OR5H1A6NKK0 313 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 H0Y980 276 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 DFFBO76075 338 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 CCNOP22674 350 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 ZNF726P1Q15940 193 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 ZNF787Q6DD87 383 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 DPPA3Q6W0C5 159 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 Q8NFD4 153 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 SPSB4Q96A44 273 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 TECTBQ96PL2 329 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 HIPK2Q9H2X6 1198 aa9.34□□□□□ -0.91
SNIP1-204ENST00000638725 ELOA3CA0A087WX78 387 aaPredicted RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 C3orf80F5H4A9 247 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 MMP7P09237 267 aaPredicted RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 BCL2P10415 239 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 CCL2P13500 99 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 F2RP25116 425 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 EPHA8P29322 1005 aaPredicted RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 CLDN15P56746 228 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FGF12P61328 243 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 PCBD1P61457 104 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 PRDX4Q13162 271 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 OR8G1Q15617 311 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 OR10D3Q8NH80 312 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 C1QTNF5Q9BXJ0 243 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 WDR54Q9H977 334 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 MTCH1Q9NZJ7 389 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 NCKAP5O14513 1909 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 TRAV1-1A0A0B4J248 108 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A10PA6NDY2 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A18PA6NE21 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A16PA6NEW6 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A20PA6NIJ5 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A8PA6NJQ4 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A7PA6NKC0 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A12PA8MX19 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A5PA8MXJ8 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A23PA8MXZ1 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 B4DEV8 164 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 CLDN34H7C241 214 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 DNPH1O43598 174 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 PTBP3O95758 552 aaKnown RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 CYB5R3P00387 301 aaPredicted RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 RFPL3SP0C7P2 107 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A15PP0C7V4 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A13PP0C7W8 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A14PP0C7W9 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM90A24PP0C7X0 464 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 PGA5P0DJD9 388 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 PSG2P11465 335 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 ZFP36L1Q07352 338 aaKnown RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 PCSK4Q6UW60 755 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 FAM180AQ6UWF9 173 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 C20orf204Q6ZNR8 217 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 H1FOOQ8IZA3 346 aaPredicted RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 ABHD3Q8WU67 409 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 CISD1Q9NZ45 108 aaKnown RBP9.33□□□□□ -0.92
SNIP1-204ENST00000638725 ATP23Q9Y6H3 246 aa9.33□□□□□ -0.92
SNIP1-204ENST00000638725 KIR2DS1A0A191URI9 304 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 A0A1B0GU03 582 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 KIAA1324LA8MWY0 1029 aaPredicted RBP9.32□□□□□ -0.92
SNIP1-204ENST00000638725 KLF7O75840 302 aaPredicted RBP9.32□□□□□ -0.92
SNIP1-204ENST00000638725 IAPPP10997 89 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 SRD5A2P31213 254 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 KIR2DS4P43632 304 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 RND2P52198 227 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 MLF1P58340 268 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 ARL16Q0P5N6 197 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 KIR2DS1Q14954 304 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 WIPI1Q5MNZ9 446 aaPredicted RBP9.32□□□□□ -0.92
SNIP1-204ENST00000638725 C9orf135Q5VTT2 229 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 ABLIM2Q6H8Q1 611 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 ZNF880Q6PDB4 577 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 UNQ6494/PRO21346Q6UXR6 183 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 Q6ZRM9 215 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 RNASE11Q8TAA1 199 aaKnown RBP9.32□□□□□ -0.92
SNIP1-204ENST00000638725 IL22RA2Q969J5 263 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 PRO1933Q9H354 126 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 SRSF7Q16629 238 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNIP1-204ENST00000638725 OR2V1Q8NHB1 315 aa9.32□□□□□ -0.92
SNIP1-204ENST00000638725 M1APQ8TC57 530 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms