RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 GZMHP20718 246 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 SPHARQ15513 63 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 MED22Q15528 200 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 ACSM3Q53FZ2 586 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 FBLN7Q53RD9 439 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 MS4A15Q8N5U1 240 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 UBALD1Q8TB05 177 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 SGCDQ92629 289 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 ARL11Q969Q4 196 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 TMED9Q9BVK6 235 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 SELENOIQ9C0D9 397 aa13.41□□□□□ -0.26
CACNA1A-259ENST00000638114 ERICH4A6NGS2 130 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 MCRIP1C9JLW8 97 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 AIPO00170 330 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 CRTAPO75718 401 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 OR2F2O95006 317 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 CD28P10747 220 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 MGMTP16455 207 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 MADCAM1Q13477 382 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 FAM27D1Q5T7N8 215 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 RAB12Q6IQ22 244 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 ZNF497Q6ZNH5 498 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 LYPD6Q86Y78 171 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 LYG1Q8N1E2 194 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 TMEM104Q8NE00 496 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 OR10X1Q8NGY0 326 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 RBM14Q96PK6 669 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 UQCC2Q9BRT2 126 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 WNT10AQ9GZT5 417 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 RCC2Q9P258 522 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 LSM2Q9Y333 95 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 TPRKBQ9Y3C4 175 aa13.4□□□□□ -0.26
CACNA1A-259ENST00000638114 A0A1W2PPE3 182 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 H0YHG0 523 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 C15orf65H3BRN8 121 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 SDCBPO00560 298 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 MT-ND4P03905 459 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 MYF6P23409 242 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 SLC35A2P78381 396 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 GPR50Q13585 617 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 NSUN5P1Q3KNT7 163 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 ABCA11PQ4W5N1 156 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 RBM48Q5RL73 367 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 UNQ9370/PRO34162Q6UXP9 181 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 SLC16A12Q6ZSM3 486 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 OR56B4Q8NH76 319 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM46BQ96A09 425 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 VCX3BQ9H321 246 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 ETAA1Q9NY74 926 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 TRAPPC2LQ9UL33 140 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 PEX16Q9Y5Y5 336 aa13.39□□□□□ -0.27
CACNA1A-259ENST00000638114 ORC5O43913 435 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 LPLP06858 475 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 SNRNP70P08621 437 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM106CPP0CH98 169 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 VHLP40337 213 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 RAB7AP51149 207 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 DIAPH2-AS1Q14236 149 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 IRF3Q14653 427 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 DRAM1Q8N682 238 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 OR4K15Q8NH41 348 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 Q96M66 194 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 OCSTAMPQ9BR26 566 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 ANKRD60Q9BZ19 345 aa13.38□□□□□ -0.27
CACNA1A-259ENST00000638114 IGHV3-43A0A0B4J1X8 118 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 A0A1W2PPI3 338 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A10PA6NDY2 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A18PA6NE21 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A16PA6NEW6 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A20PA6NIJ5 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A7PA6NKC0 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A12PA8MX19 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A5PA8MXJ8 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A23PA8MXZ1 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 RGS10O43665 173 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 MPIG6BO95866 241 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A15PP0C7V4 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A13PP0C7W8 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A14PP0C7W9 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 FAM90A24PP0C7X0 464 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 HSMCR30P0CW71 290 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 IGHV3-43DP0DP04 118 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 GP2P55259 537 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 HES1Q14469 280 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 HSD17B12Q53GQ0 312 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 SYT6Q5T7P8 510 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 LIPKQ5VXJ0 399 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 GLT8D1Q68CQ7 371 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 CEACAM19Q7Z692 300 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 LRRTM1Q86UE6 522 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 OR8H3Q8N146 312 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 OR52M1Q8NGK5 317 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 UFD1Q92890 307 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 CITED2Q99967 270 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 CST11Q9H112 138 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 GFOD1Q9NXC2 390 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 GHRLQ9UBU3 117 aa13.37□□□□□ -0.27
CACNA1A-259ENST00000638114 UBE2QL1A1L167 161 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms