RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 P2RY1P47900 373 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 PRR18Q8N4B5 295 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 DMBX1Q8NFW5 382 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 ZNF71Q9NQZ8 489 aaPredicted RBP18.21■□□□□ 0.51
CLN6-224ENST00000638076 OR1A1Q9P1Q5 309 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 SH2D1BO14796 132 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 PGLYRP1O75594 196 aaPredicted RBP18.21■□□□□ 0.51
CLN6-224ENST00000638076 CGAP01215 116 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 UCP1P25874 307 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 AKR1C2P52895 323 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 AKR1C1Q04828 323 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 MST1LQ2TV78 715 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 IGFL3Q6UXB1 125 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 SEM1Q6ZVN7 128 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 TRAPPC2LQ9UL33 140 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 FZR1Q9UM11 496 aa18.21■□□□□ 0.51
CLN6-224ENST00000638076 TM4SF5O14894 197 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 GNMTQ14749 295 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 GPR157Q5UAW9 335 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 MOB1BQ7L9L4 216 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 GLS2Q9UI32 602 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 CACNA1GO43497 2377 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 ZNF292O60281 2723 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 BOD1L1Q8NFC6 3051 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 ADAM20O43506 726 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 SHEQ5VZ18 495 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 UBAC2Q8NBM4 344 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 SAT2Q96F10 170 aaPredicted RBP18.2■□□□□ 0.5
CLN6-224ENST00000638076 SMIM8Q96KF7 97 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 OR14J1Q9UGF5 321 aa18.2■□□□□ 0.5
CLN6-224ENST00000638076 H0Y980 276 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 PXDC1Q5TGL8 231 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 ZNF826PQ6ZT77 177 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 SPIN2AQ99865 258 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 SPIN2BQ9BPZ2 258 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 HRH4Q9H3N8 390 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 MMP26Q9NRE1 261 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 LAMA5O15230 3695 aa18.19■□□□□ 0.5
CLN6-224ENST00000638076 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 MBD3L4A6NDZ8 208 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 MBD3L3A6NE82 208 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 MBD3L5A6NJ08 208 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 NPIPB11E5RHQ5 1161 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 TIMM8AO60220 97 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 MED6O75586 246 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 IGLV1-44P01699 117 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 S100GP29377 79 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 NKX2-1P43699 371 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 CEBPDP49716 269 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 SULT1A2P50226 295 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 FABP6P51161 128 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 ARHGDIBP52566 201 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 ATRAIDQ6UW56 229 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 BHLHA15Q7RTS1 189 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 MBD3L2Q8NHZ7 208 aaPredicted RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 PLA2G2EQ9NZK7 142 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 IGHV1-18A0A0C4DH31 117 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 DUXBA0A1W2PPF3 345 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 HAND1O96004 215 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 F2RP25116 425 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 NHLH2Q02577 135 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 P2RY6Q15077 328 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 OR10V1Q8NGI7 309 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 OR5D13Q8NGL4 314 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 UBALD1Q8TB05 177 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 BCL2L14Q9BZR8 327 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 WFDC1Q9HC57 220 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 HES4Q9HCC6 221 aa18.18■□□□□ 0.5
CLN6-224ENST00000638076 DSPP15924 2871 aaKnown RBP18.18■□□□□ 0.5
CLN6-224ENST00000638076 NUDT19A8MXV4 375 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 VDAC1P21796 283 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 LPAR6P43657 344 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 SRSF3P84103 164 aaKnown RBP18.17■□□□□ 0.5
CLN6-224ENST00000638076 DEFA5Q01523 94 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 NMSQ5H8A3 153 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 C11orf53Q8IXP5 236 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 LRRC46Q96FV0 321 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 CXXC4Q9H2H0 198 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 TAAR3PQ9P1P4 343 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 IGHV2OR16-5A0A0B4J2B6 119 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 WNT9BO14905 357 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 ACAA1P09110 424 aaPredicted RBP18.17■□□□□ 0.5
CLN6-224ENST00000638076 KITLGP21583 273 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 POLR2GP62487 172 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLN6-224ENST00000638076 HOXA4Q00056 320 aaPredicted RBP18.17■□□□□ 0.5
CLN6-224ENST00000638076 FIP1L1Q6UN15 594 aaKnown RBP18.17■□□□□ 0.5
CLN6-224ENST00000638076 Q6ZR03 302 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 OR51H1Q8NH63 302 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 PRR14LQ5THK1 2151 aa18.17■□□□□ 0.5
CLN6-224ENST00000638076 INTS1Q8N201 2190 aaKnown RBP18.17■□□□□ 0.5
CLN6-224ENST00000638076 TMEM218A2RU14 115 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 ABCD4O14678 606 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 HSPA12AO43301 675 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 IL34Q6ZMJ4 242 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 Q6ZS92 163 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 BEND4Q6ZU67 534 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 C11orf1Q9H5F2 150 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 MSL2Q9HCI7 577 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 MBNL3Q9NUK0 354 aaKnown RBP18.16■□□□□ 0.5
CLN6-224ENST00000638076 BORCS7-ASMTA0A0B4J1R7 106 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms