RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TMEM30CPA0ZSE6 113 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 ADARB2-AS1A8MUL3 147 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 LPLP06858 475 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 BRS3P32247 399 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 GABPB1Q06547 395 aaPredicted RBP14.14□□□□□ -0.15
PNKP-230ENST00000638016 C10orf99Q6UWK7 81 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 C5orf24Q7Z6I8 188 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 CAPSLQ8WWF8 208 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 FAM46BQ96A09 425 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 RPEQ96AT9 228 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 TMED9Q9BVK6 235 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 KCNK15Q9H427 330 aa14.14□□□□□ -0.15
PNKP-230ENST00000638016 ERICH4A6NGS2 130 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 ZNF780AO75290 641 aaPredicted RBP14.13□□□□□ -0.15
PNKP-230ENST00000638016 OR2F2O95006 317 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 CD1AP06126 327 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 SNRNP70P08621 437 aaKnown RBP14.13□□□□□ -0.15
PNKP-230ENST00000638016 CEACAM3P40198 252 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 REG1BP48304 166 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 PDLIM3Q53GG5 364 aaPredicted RBP14.13□□□□□ -0.15
PNKP-230ENST00000638016 SIGIRRQ6IA17 410 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 ZNF497Q6ZNH5 498 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 LINC00596Q86U02 117 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 DRAM1Q8N682 238 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 OR4K15Q8NH41 348 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 ARL11Q969Q4 196 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 RBM14Q96PK6 669 aaKnown RBP14.13□□□□□ -0.15
PNKP-230ENST00000638016 SELENOIQ9C0D9 397 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 LIN7BQ9HAP6 207 aa14.13□□□□□ -0.15
PNKP-230ENST00000638016 RCC2Q9P258 522 aaKnown RBP14.13□□□□□ -0.15
PNKP-230ENST00000638016 G3V4G9 280 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 AIPO00170 330 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 SLC31A2O15432 143 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 PEX14O75381 377 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 CRTAPO75718 401 aaPredicted RBP14.12□□□□□ -0.15
PNKP-230ENST00000638016 MT-ND4P03905 459 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 MGMTP16455 207 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 IRF3Q14653 427 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 ACSM3Q53FZ2 586 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 OR10K2Q6IF99 312 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 RAB12Q6IQ22 244 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 MND1Q9BWT6 205 aa14.12□□□□□ -0.15
PNKP-230ENST00000638016 IGHV3-72A0A0B4J1Y9 119 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 A0A1W2PRX2 142 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A18PA6NE21 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A16PA6NEW6 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A20PA6NIJ5 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A9PA6NNJ1 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A12PA8MX19 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A5PA8MXJ8 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 SDCBPO00560 298 aaPredicted RBP14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 MNDAP41218 407 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 LOXL3P58215 753 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 SLC35A2P78381 396 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 MADCAM1Q13477 382 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 HNF4GQ14541 408 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 SPHARQ15513 63 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 MED22Q15528 200 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 TCTEX1D4Q5JR98 221 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 C9orf152Q5JTZ5 239 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 UNQ9370/PRO34162Q6UXP9 181 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 C16orf82Q7Z2V1 217 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 LRRTM1Q86UE6 522 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 CREB3L1Q96BA8 519 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 Q96M66 194 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 ETAA1Q9NY74 926 aa14.11□□□□□ -0.15
PNKP-230ENST00000638016 AMMECR1Q9Y4X0 333 aaPredicted RBP14.11□□□□□ -0.15
PNKP-230ENST00000638016 UBE2QL1A1L167 161 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OOSP1A8MZH6 123 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 C12orf77C9JDV5 145 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OPN1MWP04001 364 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OPN1MW2P0DN77 364 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OPN1MW3P0DN78 364 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 ARHGDIBP52566 201 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 GPR176Q14439 515 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 SYT6Q5T7P8 510 aaPredicted RBP14.1□□□□□ -0.15
PNKP-230ENST00000638016 RNLSQ5VYX0 342 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 CCDC144NLQ6NUI1 221 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 PRR18Q8N4B5 295 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 NKAIN3Q8N8D7 197 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OR5AU1Q8NGC0 362 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OR10V1Q8NGI7 309 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OR10X1Q8NGY0 326 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 OR1L1Q8NH94 360 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 MYDGFQ969H8 173 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 TMEM203Q969S6 136 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 GFOD1Q9NXC2 390 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 PEX16Q9Y5Y5 336 aa14.1□□□□□ -0.15
PNKP-230ENST00000638016 MCRIP1C9JLW8 97 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 HSD17B6O14756 317 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 MPIG6BO95866 241 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 IGKV1D-33P01593 117 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 IGKV1-33P01594 117 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 RCC1P18754 421 aaPredicted RBP14.09□□□□□ -0.15
PNKP-230ENST00000638016 GZMHP20718 246 aa14.09□□□□□ -0.15
PNKP-230ENST00000638016 MAPK3P27361 379 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms