RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 A0A1W2PRV1 198 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 GSTP1P09211 210 aaKnown RBP13.12□□□□□ -0.31
CLN6-216ENST00000636876 ELK1P19419 428 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 GZMHP20718 246 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 PRTN3P24158 256 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 CMSS1Q9BQ75 279 aaKnown RBP13.12□□□□□ -0.31
CLN6-216ENST00000636876 NXF2Q9GZY0 626 aaKnown RBP13.12□□□□□ -0.31
CLN6-216ENST00000636876 RIMS4Q9H426 269 aaPredicted RBP13.12□□□□□ -0.31
CLN6-216ENST00000636876 CHMP1AQ9HD42 196 aaPredicted RBP13.12□□□□□ -0.31
CLN6-216ENST00000636876 C12orf4Q9NQ89 552 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 BATF3Q9NR55 127 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 MBNL3Q9NUK0 354 aaKnown RBP13.12□□□□□ -0.31
CLN6-216ENST00000636876 CALYQ9NYX4 217 aa13.12□□□□□ -0.31
CLN6-216ENST00000636876 TRBV6-6A0A0A6YYG2 114 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 KBTBD11-OT1A0A1B0GTJ5 212 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 CTDSP2O14595 271 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 XRCC3O43542 346 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 CLPXO76031 633 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 CD3GP09693 182 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 HNF1AP20823 631 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 C6orf183Q5T699 404 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 ZNF880Q6PDB4 577 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 IL17RELQ6ZVW7 336 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 MOB1BQ7L9L4 216 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 IZUMO1Q8IYV9 350 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 TEX29Q8N6K0 151 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 MCFD2Q8NI22 146 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 MIXL1Q9H2W2 232 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 LINC00574Q9H8X3 128 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 SIRT7Q9NRC8 400 aa13.11□□□□□ -0.31
CLN6-216ENST00000636876 ELF5Q9UKW6 265 aaPredicted RBP13.11□□□□□ -0.31
CLN6-216ENST00000636876 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 TMEM235A6NFC5 223 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 FAM25AB3EWG3 89 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 FAM25CB3EWG5 89 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 FAM25GB3EWG6 89 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 INAFM1C9JVW0 142 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 RGS5O15539 181 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 ORC5O43913 435 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 FSHBP01225 129 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 IGHV1-8P0DP01 117 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
CLN6-216ENST00000636876 SSTR5P35346 364 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 DLX1P56177 255 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 TAS2R20P59543 309 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 MRPS15P82914 257 aaKnown RBP13.1□□□□□ -0.31
CLN6-216ENST00000636876 ARFRP1Q13795 201 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 PNLIPRP3Q17RR3 467 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 KLF17Q5JT82 389 aaPredicted RBP13.1□□□□□ -0.31
CLN6-216ENST00000636876 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 PRAMEF5Q5TYX0 476 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 TRAT1Q6PIZ9 186 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 HEPN1Q6WQI6 88 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 Q6ZPA2 131 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 DTX3Q8N9I9 347 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 NANPQ8TBE9 248 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 TNFRSF14Q92956 283 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 ARL11Q969Q4 196 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
CLN6-216ENST00000636876 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 SESN1Q9Y6P5 492 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 A3GALT2U3KPV4 340 aa13.1□□□□□ -0.31
CLN6-216ENST00000636876 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 C12orf77C9JDV5 145 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 NPIPB11E5RHQ5 1161 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 C15orf65H3BRN8 121 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 MMP23AO75900 390 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 MELTFP08582 738 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 GDNFP39905 211 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 KLRD1Q13241 179 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 NCR3LG1Q68D85 454 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 ZNF782Q6ZMW2 699 aaPredicted RBP13.09□□□□□ -0.31
CLN6-216ENST00000636876 ZNF554Q86TJ5 538 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 LAX1Q8IWV1 398 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 RFESDQ8TAC1 157 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 SETD6Q8TBK2 473 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 LHX4Q969G2 390 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 HEXA-AS1Q9H8Q6 139 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 TAF9BQ9HBM6 251 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 KCNIP1Q9NZI2 227 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 ADAM30Q9UKF2 790 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 CDC42EP3Q9UKI2 254 aa13.09□□□□□ -0.31
CLN6-216ENST00000636876 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 SPINT2O43291 252 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 HBZP02008 142 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 FCGR3AP08637 254 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 IGHV4-38-2P0DP08 117 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 OMGP23515 440 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 DTYMKP23919 212 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 SRP14P37108 136 aaKnown RBP13.08□□□□□ -0.32
CLN6-216ENST00000636876 TALDO1P37837 337 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 MNDAP41218 407 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 GNG2P59768 71 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 PITPNAQ00169 270 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms