RNA–Protein interactions for RNA: ENST00000636751.2

TCF4-280, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 8,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-280	ENST00000636751	PPP1CB	P62140	327 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	SNRPG	P62308	76 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	TNFRSF9	Q07011	255 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	SPATA45	Q537H7	98 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	CD300LD	Q6UXZ3	194 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	ATP5S	Q99766	215 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	RHNO1	Q9BSD3	238 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	TMED7	Q9Y3B3	224 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751		J3KTA2	159 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751		J3QR06	171 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	SEMA7A	O75326	666 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	OR4A8	P0C604	315 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	ZNF735	P0CB33	412 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	DUSP1	P28562	367 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	TACR3	P29371	465 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	APOBEC3A	P31941	199 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	METAP1	P53582	386 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	CDCP2	Q5VXM1	449 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	LCN10	Q6JVE6	187 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	ZNF880	Q6PDB4	577 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	DRAM2	Q6UX65	266 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	TMEM183A	Q8IXX5	376 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	OR5D18	Q8NGL1	313 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	NSUN5	Q96P11	429 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	SHARPIN	Q9H0F6	387 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	GLIPR2	Q9H4G4	154 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	JKAMP	Q9P055	326 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751		A0A1W2PQL4	384 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751		H3BML4	177 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	RPL22L1	Q6P5R6	122 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	ARHGEF39	Q8N4T4	335 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	OR5A1	Q8NGJ0	315 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	OR13C8	Q8NGS7	320 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	ZMYND19	Q96E35	227 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	RBM24	Q9BX46	236 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	CHST6	Q9GZX3	395 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	RBKS	Q9H477	322 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	SLC17A5	Q9NRA2	495 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	NAGK	Q9UJ70	344 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	PCSK5	Q92824	1860 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	TRAV38-1	A0A0B4J264	116 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	OR2W5	A6NFC9	320 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751		B9A039	149 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751		H3BMH7	237 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	UCP1	P25874	307 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	SUB1	P53999	127 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	ZIC1	Q15915	447 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	PMCHL1	Q16048	86 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	IGFBP7	Q16270	282 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	TMEM105	Q8N8V8	129 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	OR4C3	Q8NH37	302 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	LINC00470	Q9BZP3	86 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	NMNAT2	Q9BZQ4	307 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	SLC25A32	Q9H2D1	315 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	G6PC2	Q9NQR9	355 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	PIPOX	Q9P0Z9	390 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	UFC1	Q9Y3C8	167 aa		4.26	□□□□□ -1.73
TCF4-280	ENST00000636751	HCRT	O43612	131 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	SFTPD	P35247	375 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	GPR4	P46093	362 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	TMEM258	P61165	79 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	RPL27	P61353	136 aa	Known RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	BRICD5	Q6PL45	260 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	ATP5L2	Q7Z4Y8	100 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	SFTPA2	Q8IWL1	248 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	SFTPA1	Q8IWL2	248 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	BMPER	Q8N8U9	685 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	SLC35E1	Q96K37	410 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	HCST	Q9UBK5	93 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	PLAGL1	Q9UM63	463 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	OAZ3	Q9UMX2	235 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	IGLV3-32	A0A0A0MS00	114 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	GAPDHS	O14556	408 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	MGST3	O14880	152 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	ZFPL1	O95159	310 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	SP1	P08047	785 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	TIMP3	P35625	211 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	CLDN15	P56746	228 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	TM4SF20	Q53R12	229 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	PABPC1L2A	Q5JQF8	200 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	AWAT2	Q6E213	333 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	MRGPRD	Q8TDS7	321 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	GPR146	Q96CH1	333 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	TSSK6	Q9BXA6	273 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	NAT8	Q9UHE5	227 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	PSG11	Q9UQ72	335 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	F11R	Q9Y624	299 aa	Known RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	GPR31	O00270	319 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	TSPAN2	O60636	221 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	SIX3	O95343	332 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	MBP	P02686	304 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	SPN	P16150	400 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	MS4A2	Q01362	244 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	OR1Q1	Q15612	314 aa		4.25	□□□□□ -1.73
TCF4-280	ENST00000636751	RRN3P1	Q2M238	152 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms