RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 AGMATQ9BSE5 352 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 SF3B5Q9BWJ5 86 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 NAT8Q9UHE5 227 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 SHANK1Q9Y566 2161 aa12.72□□□□□ -0.37
CACNA1A-220ENST00000635988 CCDC163A0A0D9SF12 145 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 NAPSAO96009 420 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 AMBPP02760 352 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 LCN15Q6UWW0 184 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 SLC25A26Q70HW3 274 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 PIGCQ92535 297 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 ACY3Q96HD9 319 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 PPP1R14DQ9NXH3 145 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF880Q6PDB4 577 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 DMRTC2Q8IXT2 367 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 ZNF837Q96EG3 531 aaPredicted RBP12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 MISP3Q96FF7 219 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 TMEM38BQ9NVV0 291 aa12.71□□□□□ -0.37
CACNA1A-220ENST00000635988 GON4LQ3T8J9 2241 aa12.71□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF32P17041 273 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 DSCR4P56555 118 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 RELQ04864 619 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 CLN3Q13286 438 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 NCR3LG1Q68D85 454 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 TCEAL6Q6IPX3 200 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 CYP2G1PQ6ZSU1 146 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 CADM4Q8NFZ8 388 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 CPT1CQ8TCG5 803 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 PCED1AQ9H1Q7 454 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 CCL28Q9NRJ3 127 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 IGKV1D-13A0A0B4J2D9 117 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 CEBPZOSA8MTT3 80 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 DNPH1O43598 174 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 PGLYRP1O75594 196 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 HLA-HP01893 362 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 PFN1P07737 140 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 SCTP09683 121 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 IGKV1-13P0DP09 117 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 F2RP25116 425 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 MDH2P40926 338 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 PCBD1P61457 104 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF92Q03936 586 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 USF2Q15853 346 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 WDR25Q64LD2 544 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 ABLIM2Q6H8Q1 611 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 OR5B12Q96R08 314 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 CDH23Q9H251 3354 aa12.7□□□□□ -0.38
CACNA1A-220ENST00000635988 GJE1A6NN92 205 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 PPP5D1E7EU14 171 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 SCRG1O75711 98 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 NXPH3O95157 252 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 CYC1P08574 325 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 PRSS12P56730 875 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 HBG1P69891 147 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 HBG2P69892 147 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 DAZAP2Q15038 168 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 TMEM241Q24JQ0 296 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 TMEM41BQ5BJD5 291 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 CALHM1Q8IU99 346 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 SAXO1Q8IYX7 474 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 RSG1Q9BU20 258 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 PARD6GQ9BYG4 376 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 OR14J1Q9UGF5 321 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 ATP23Q9Y6H3 246 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 SLC33A1O00400 549 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 SERPINE2P07093 398 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 COL10A1Q03692 680 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 TMEM267Q0VDI3 215 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF726P1Q15940 193 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF664Q8N3J9 261 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 DNASE2BQ8WZ79 361 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 GPR146Q96CH1 333 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 SMIM7Q9BQ49 75 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 PRSS50Q9UI38 385 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 GAB2Q9UQC2 676 aa12.69□□□□□ -0.38
CACNA1A-220ENST00000635988 XKRY2A2RUG3 117 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 LRP5LA4QPB2 252 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 LIFP15018 202 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 FAM3BP58499 235 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 RAC1P63000 192 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 HERPUD1Q15011 391 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 ADIRFQ15847 76 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 LRRC75BQ2VPJ9 315 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 HIST1H2AAQ96QV6 131 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 OR6C1Q96RD1 312 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 A0A1B0GWJ7 208 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 MAP1LC3B2A6NCE7 125 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 KIAA1324LA8MWY0 1029 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 H3BP45 60 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 WNT2P09544 360 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 PDLIM4P50479 330 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 FGF12P61328 243 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 PSG4Q00888 419 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 TRIM61Q5EBN2 209 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 CENPVQ7Z7K6 275 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 ZNF525Q8N782 197 aa12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 LSM10Q969L4 123 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-220ENST00000635988 SPSB4Q96A44 273 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms