RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 OR5B21A6NL26 309 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF99A8MXY4 864 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TMEM114B3SHH9 223 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 LYNX1G3V0Z9 82 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 M0R233 179 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 SRSF10O75494 262 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 OR7A10O76100 309 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 VAMP5O95183 116 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 FSTL3O95633 263 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 IGHV3-48P01763 117 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 IGHV3-23P01764 117 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 HLA-HP01893 362 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 BGLAPP02818 100 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 MMP7P09237 267 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TFPTP0C1Z6 253 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 RBMY1CP0DJD4 496 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 PGA4P0DJD7 388 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 PGA3P0DJD8 388 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 OR12D1P0DN82 309 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 LYNX1P0DP58 116 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TBPP20226 339 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ARR3P36575 388 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 KIR2DS4P43632 304 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 IDH2P48735 452 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 MRPL19P49406 292 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TMEM33P57088 247 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 EGFEM1PQ0D2K5 195 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 BNIP2Q12982 314 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 OR7A5Q15622 319 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 HIST3H3Q16695 136 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 CEACAM16Q2WEN9 425 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 LIN52Q52LA3 116 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 SAMD4BQ5PRF9 694 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 KPRPQ5T749 579 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 C9orf135Q5VTT2 229 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 C1orf140Q5VVS0 124 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 UNQ9370/PRO34162Q6UXP9 181 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 C12orf54Q6X4T0 127 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ZCCHC23Q6ZST2 131 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 SLC25A48Q6ZT89 311 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 AAED1Q7RTV5 226 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ABHD12BQ7Z5M8 362 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 HMGN2P46Q86SG4 172 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 LRP11Q86VZ4 500 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 VRK2Q86Y07 508 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ERI1Q8IV48 349 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 MSRB3Q8IXL7 192 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 C20orf196Q8IYI0 205 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 RDH10Q8IZV5 341 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 C4orf33Q8N1A6 199 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 RIBC1Q8N443 379 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 FNDC5Q8NAU1 212 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ATP6V1C2Q8NEY4 427 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 OR51F2Q8NH61 342 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 MFSD8Q8NHS3 518 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TYMSOSQ8TAI1 123 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TSEN15Q8WW01 171 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 C10orf82Q8WW14 230 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 CHCHD10Q8WYQ3 142 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 RAB8BQ92930 207 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 SLC38A4Q969I6 547 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 DDIT4LQ96D03 193 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ZHX1-C8orf76Q96EF9 292 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 AURKBQ96GD4 344 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TSPAN32Q96QS1 320 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 MBOAT4Q96T53 435 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 HIST1H4GQ99525 98 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 WFDC6Q9BQY6 131 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 C1QTNF6Q9BXI9 259 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 MFFQ9GZY8 342 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 IQCGQ9H095 443 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 RAB1BQ9H0U4 201 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 TPK1Q9H3S4 243 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 METTL17Q9H7H0 456 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ISG20L2Q9H9L3 353 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 CRLF2Q9HC73 371 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 BCL2L10Q9HD36 194 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 AIG1Q9NVV5 245 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 SLC25A37Q9NYZ2 338 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 SLC17A7Q9P2U7 560 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 Q9UF83 564 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF443Q9Y2A4 671 aaPredicted RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 KCNIP3Q9Y2W7 256 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 STARD10Q9Y365 291 aa1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 HUWE1Q7Z6Z7 4374 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 PLECQ15149 4684 aaKnown RBP1.79□□□□□ -2.12
SMARCB1-208ENST00000634926 HYDINQ4G0P3 5121 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 PLXNB1O43157 2135 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 DOCK11Q5JSL3 2073 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 TRAV36DV7A0A075B6V5 113 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 A0A087WUJ7 227 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 UQCRHLA0A096LP55 91 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 IGHV1-69-2A0A0G2JMI3 117 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 A0A0G2JMP0 313 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 A0A0X1KG70 313 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 A0A1B0GWA3 101 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 H3BSA7 217 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 COPEO14579 308 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 MGRN1O60291 552 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 FCN3O75636 299 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms