RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ANGPTL6Q8NI99 470 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 PLPPR1Q8TBJ4 325 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 LRRC20Q8TCA0 184 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 DCUN1D4Q92564 292 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 RRNAD1Q96FB5 475 aaKnown RBP4.69□□□□□ -1.66
NEK3-211ENST00000629912 ABHD14BQ96IU4 210 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 KIRREL1Q96J84 757 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 LURAP1Q96LR2 239 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 TP53RKQ96S44 253 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 REG4Q9BYZ8 158 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 DNTTIP1Q9H147 329 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 NCOR1P1Q9H4R4 102 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 CCL28Q9NRJ3 127 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 OR5AC2Q9NZP5 309 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 GSKIPQ9P0R6 139 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 TAAR3PQ9P1P4 343 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 Q9UFV3 132 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 TRAPPC2LQ9UL33 140 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 NSG2Q9Y328 171 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 ZFHX4Q86UP3 3567 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 CELSR3Q9NYQ7 3312 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 CACNA1DQ01668 2161 aa4.69□□□□□ -1.66
NEK3-211ENST00000629912 LOC400499M0QZD8 3231 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 IGKV1D-13A0A0B4J2D9 117 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 A0A1B0GW55 424 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 OOEPA6NGQ2 149 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SRRM5B3KS81 715 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 H0Y980 276 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 M0R1B8 84 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 HSPB6O14558 160 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ST8SIA3O43173 380 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 PHF1O43189 567 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 FGF16O43320 207 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 PSPNO60542 156 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DEDDO75618 318 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 LHBP01229 141 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 MBPP02686 304 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUX4L2P0CJ85 424 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUX4L3P0CJ86 424 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUX4L4P0CJ87 422 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUX4L5P0CJ88 424 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUX4L6P0CJ89 424 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUX4L7P0CJ90 424 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 IGKV1-13P0DP09 117 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SLC25A6P12236 298 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 TPT1P13693 172 aaKnown RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 MMP9P14780 707 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 PTAFRP25105 342 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 F2RP25116 425 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 CD40P25942 277 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 PRDX2P32119 198 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 GATA4P43694 442 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 P2RY1P47900 373 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 LUMP51884 338 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 KLF3P57682 345 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 TMPRSS3P57727 454 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SELENOVP59797 346 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 EIF5AP63241 154 aaKnown RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 ID3Q02535 119 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 RBPJQ06330 500 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SMCO1Q147U7 214 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ATXN7L3Q14CW9 347 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 TESK1Q15569 626 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 AANATQ16613 207 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 MSMPQ1L6U9 139 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 CR1LQ2VPA4 569 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SMIM21Q3B7S5 101 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 TMEM268Q5VZI3 342 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 TRAT1Q6PIZ9 186 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ALKAL2Q6UX46 152 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 GFRALQ6UXV0 394 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ZNF818PQ6ZRF7 136 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ZNF826PQ6ZT77 177 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 COMMD7Q86VX2 200 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 LRP11Q86VZ4 500 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ZNF695Q8IW36 515 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 BAP18Q8IXM2 172 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 FAM71E2Q8N5Q1 922 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 NUP37Q8NFH4 326 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 OR10V1Q8NGI7 309 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 OR4D5Q8NGN0 318 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 LHFPL5Q8TAF8 219 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 FAM216AQ8WUB2 273 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 TMEM171Q8WVE6 324 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SECTM1Q8WVN6 248 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ERGIC1Q969X5 290 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SNRNP40Q96DI7 357 aaKnown RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 CITED4Q96RK1 184 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DMRTA2Q96SC8 542 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SPIN2AQ99865 258 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 SPIN2BQ9BPZ2 258 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ZNF471Q9BX82 626 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 TAF9BQ9HBM6 251 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 MSL2Q9HCI7 577 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 KCNIP1Q9NZI2 227 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 LUZP4Q9P127 313 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUX4Q9UBX2 424 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 DUSP13Q9UII6 198 aa4.68□□□□□ -1.66
NEK3-211ENST00000629912 ERRFI1Q9UJM3 462 aaPredicted RBP4.68□□□□□ -1.66
NEK3-211ENST00000629912 ZDHHC8Q9ULC8 765 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms