RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 IGHG1P01857 330 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 RLN1P04808 185 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 RPA2P15927 270 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ANOS1P23352 680 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM33P57088 247 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 HILS1P60008 231 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 UBE2MP61081 183 aaKnown RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 RPP30P78346 268 aaKnown RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 HLXQ14774 488 aaPredicted RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 AANATQ16613 207 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OR10K2Q6IF99 312 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 IDO2Q6ZQW0 420 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF627Q7L945 461 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 HDDC2Q7Z4H3 204 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OR5AS1Q8N127 324 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 LRRC18Q8N456 261 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 SLC22A24Q8N4F4 322 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 JAGN1Q8N5M9 183 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OR52N4Q8NGI2 321 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 NANPQ8TBE9 248 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 CCDC107Q8WV48 283 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 GTF3AQ92664 365 aaKnown RBP4.05□□□□□ -1.76
LINC00550-201ENST00000629293 FGGYQ96C11 551 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 OXGR1Q96P68 337 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM138Q9NPI0 162 aa4.05□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM235A6NFC5 223 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF736B4DX44 427 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 IGLV3-1P01715 115 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 OR4E1P0C645 316 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 S100A11P31949 105 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 CSNK1A1P48729 337 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF133P52736 654 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 RPS23P62266 143 aaKnown RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 MEF2DQ14814 521 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SIGIRRQ6IA17 410 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 FOXL2NBQ6ZUU3 175 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 TMUB2Q71RG4 321 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 OR5M8Q8NGP6 311 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 OR8S1Q8NH09 359 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 FGFBP3Q8TAT2 258 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 C17orf50Q8WW18 174 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SUCNR1Q9BXA5 334 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF665Q9H7R5 613 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SAP30LQ9HAJ7 183 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ESM1Q9NQ30 184 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 CENPMQ9NSP4 180 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 DOCK11Q5JSL3 2073 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 IGHV3-64DA0A0J9YX35 117 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 RFPL4AA6NLU0 287 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 RFPL4AL1F8VTS6 287 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SYT7O43581 403 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SSX5O60225 188 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SCGNO76038 276 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 CYB5AP00167 134 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 NMBP08949 121 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 HLA-GP17693 338 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZBTB25P24278 435 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 GLRXP35754 106 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 KLF3P57682 345 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 LMO4P61968 165 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 HFEQ30201 348 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 LPCAT3Q6P1A2 487 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 Q6ZSR3 168 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 OR2W3Q7Z3T1 314 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SIGLECL1Q8N7X8 197 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZDHHC22Q8N966 263 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 OR8B12Q8NGG6 310 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 TNFAIP8L1Q8WVP5 186 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 FAM46BQ96A09 425 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 RAB39BQ96DA2 213 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 TIMD4Q96H15 378 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 CTDSP1Q9GZU7 261 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 PPP1R14DQ9NXH3 145 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 VSIG4Q9Y279 399 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 WIPI2Q9Y4P8 454 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 A0A0A6YYD4 124 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 IGHV1-69-2A0A0G2JMI3 117 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 MFSD2BA6NFX1 497 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ARPC5O15511 151 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 RP2O75695 350 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 FARS2O95363 451 aaKnown RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF250P15622 560 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 TBPP20226 339 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 RAB3AP20336 220 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 M6PRP20645 277 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 DHRS2Q13268 280 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM65Q6PI78 240 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 CRIP3Q6Q6R5 217 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 RNF144BQ7Z419 303 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SLC25A42Q86VD7 318 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF584Q8IVC4 421 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 C12orf45Q8N5I9 185 aaPredicted RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SLC30A7Q8NEW0 376 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 SCARB1Q8WTV0 552 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 FAM216AQ8WUB2 273 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 PCNPQ8WW12 178 aaKnown RBP4.04□□□□□ -1.76
LINC00550-201ENST00000629293 CMBLQ96DG6 245 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 PRRT1Q99946 306 aa4.04□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF319Q9P2F9 582 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms