RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 TPRKBQ9Y3C4 175 aa11.87□□□□□ -0.51
LINC00643-205ENST00000623219 H0YHG0 523 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 AIPO00170 330 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 FBXO24O75426 580 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 OR2F2O95006 317 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 MGMTP16455 207 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 GZMHP20718 246 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
LINC00643-205ENST00000623219 GNG10P50151 68 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 GPR50Q13585 617 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 IRF3Q14653 427 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 MED22Q15528 200 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 LTC4SQ16873 150 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 UNQ9370/PRO34162Q6UXP9 181 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 CAPSLQ8WWF8 208 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 PHYHIPQ92561 330 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 LEAP2Q969E1 77 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 Q96M66 194 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 RBM14Q96PK6 669 aaKnown RBP11.86□□□□□ -0.51
LINC00643-205ENST00000623219 SLC25A33Q9BSK2 321 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 TMED9Q9BVK6 235 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 GHRLQ9UBU3 117 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
LINC00643-205ENST00000623219 TRAV39A0A0B4J263 110 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 MCRIP1C9JLW8 97 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 C15orf65H3BRN8 121 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 ORC5O43913 435 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 PEX14O75381 377 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 CRTAPO75718 401 aaPredicted RBP11.85□□□□□ -0.51
LINC00643-205ENST00000623219 SC5DO75845 299 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 CD24P25063 80 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 HSPA13P48723 471 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 RAB7AP51149 207 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 BLCAPP62952 87 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 MADCAM1Q13477 382 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 INSL4Q14641 139 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 ACSM3Q53FZ2 586 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 RBM48Q5RL73 367 aaKnown RBP11.85□□□□□ -0.51
LINC00643-205ENST00000623219 RAB12Q6IQ22 244 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 TMEM104Q8NE00 496 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 OR52M1Q8NGK5 317 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 RFESDQ8TAC1 157 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 WIPF2Q8TF74 440 aaPredicted RBP11.85□□□□□ -0.51
LINC00643-205ENST00000623219 SGCDQ92629 289 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 UFD1Q92890 307 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 SELENOIQ9C0D9 397 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 WNT10AQ9GZT5 417 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 CST11Q9H112 138 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 BANF2Q9H503 90 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 RAB9BQ9NP90 201 aa11.85□□□□□ -0.51
LINC00643-205ENST00000623219 A0A1W2PPI3 338 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 ERICH4A6NGS2 130 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 M0QZK8 103 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 WIPF1O43516 503 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 RGS10O43665 173 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 IGHV3-7P01780 117 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 UBBP0CG47 229 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 TMEM95Q3KNT9 176 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 TMEM30BQ3MIR4 351 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 FAM27D1Q5T7N8 215 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 GLT8D1Q68CQ7 371 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 TRAT1Q6PIZ9 186 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 Q6ZS46 218 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 OR8H3Q8N146 312 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 GAPTQ8N292 157 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 ARL11Q969Q4 196 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 DUSP21Q9H596 190 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 ETAA1Q9NY74 926 aa11.84□□□□□ -0.51
LINC00643-205ENST00000623219 FAM90A9PA6NNJ1 464 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 SDCBPO00560 298 aaPredicted RBP11.83□□□□□ -0.52
LINC00643-205ENST00000623219 HSD17B6O14756 317 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 CA11O75493 328 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 MT-ND4P03905 459 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 GLAP06280 429 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 CRHBPP24387 322 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 GP2P55259 537 aaKnown RBP11.83□□□□□ -0.52
LINC00643-205ENST00000623219 Q3ZCU0 254 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 HSD17B12Q53GQ0 312 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 C6orf183Q5T699 404 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 LIPKQ5VXJ0 399 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 IZUMO2Q6UXV1 221 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 LRRTM1Q86UE6 522 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 THNSL2Q86YJ6 484 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 C8orf31Q8N9H6 132 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 OR56B4Q8NH76 319 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 FAM110DQ8TAY7 271 aaPredicted RBP11.83□□□□□ -0.52
LINC00643-205ENST00000623219 CCDC107Q8WV48 283 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 FAM46BQ96A09 425 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 OCSTAMPQ9BR26 566 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 ISYNA1Q9NPH2 558 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 GFOD1Q9NXC2 390 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 TRAPPC2LQ9UL33 140 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 MOB4Q9Y3A3 225 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 PEX16Q9Y5Y5 336 aa11.83□□□□□ -0.52
LINC00643-205ENST00000623219 PDCD6O75340 191 aa11.82□□□□□ -0.52
LINC00643-205ENST00000623219 SNRNP70P08621 437 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms