RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PDLIM4P50479 330 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 ERVS71-1P61550 626 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 CFHR1Q03591 330 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 DAZAP2Q15038 168 aaPredicted RBP12.12□□□□□ -0.47
LDB3-209ENST00000623056 RAB35Q15286 201 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 NCR3LG1Q68D85 454 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 BATF2Q8N1L9 274 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 ADGRG7Q96K78 797 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
LDB3-209ENST00000623056 SLC22A20A6NK97 555 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
LDB3-209ENST00000623056 MRGPRGQ86SM5 289 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 OR51G1Q8NGK1 321 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 SCGB1C1Q8TD33 95 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
LDB3-209ENST00000623056 ACY3Q96HD9 319 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 A0A0G2JRQ6 117 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 CYB5R2Q6BCY4 276 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 Q6ZS52 159 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 OR5D13Q8NGL4 314 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 RBKSQ9H477 322 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 PRSS50Q9UI38 385 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 UNC13CQ8NB66 2214 aa12.11□□□□□ -0.47
LDB3-209ENST00000623056 IGLV3-19P01714 112 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 LCATP04180 440 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 SCTP09683 121 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 NUBP1P53384 320 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 PAX5Q02548 391 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 PMS2P11Q13670 270 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 CYP2G1PQ6ZSU1 146 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 ZNF845Q96IR2 970 aaPredicted RBP12.1□□□□□ -0.47
LDB3-209ENST00000623056 AGMATQ9BSE5 352 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 CCL28Q9NRJ3 127 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 GALR1P47211 349 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 ZNF774Q6NX45 483 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 DEFB119Q8N690 84 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 EXTL1Q92935 676 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 ZNF501Q96CX3 271 aaPredicted RBP12.1□□□□□ -0.47
LDB3-209ENST00000623056 PCGF1Q9BSM1 259 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 ELOVL1Q9BW60 279 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 ULBP2Q9BZM5 246 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 FGF21Q9NSA1 209 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 RNF150Q9ULK6 438 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 KIAA2026Q5HYC2 2103 aa12.1□□□□□ -0.47
LDB3-209ENST00000623056 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
LDB3-209ENST00000623056 IGHV1OR21-1A0A087WYE8 117 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 MAP1LC3B2A6NCE7 125 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 NPIPA2E9PIF3 369 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 NPIPA3F8WFD2 350 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 H7BYZ3 331 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 SYNGR3O43761 229 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 IFNA1P01562 189 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 HOXA6P31267 233 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 MDH2P40926 338 aaKnown RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 RNPS1Q15287 305 aaKnown RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 CLEC12BQ2HXU8 276 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 BSXQ3C1V8 233 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 FAM27BQ5VT28 67 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 FAM180AQ6UWF9 173 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 Q6ZS49 121 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 IL22RA2Q969J5 263 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 OR5B12Q96R08 314 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 PSMG3Q9BT73 122 aaPredicted RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 MAP1LC3BQ9GZQ8 125 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 MYOTQ9UBF9 498 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 H0Y980 276 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 ZNF737O75373 536 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 FGF5P12034 268 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 IDH3GP51553 393 aaPredicted RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 FUT6P51993 359 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 FAM3BP58499 235 aaPredicted RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 IQCJQ1A5X6 159 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 PLCXD3Q63HM9 321 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 CENPVQ7Z7K6 275 aaPredicted RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 CALHM1Q8IU99 346 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 MRPL41Q8IXM3 137 aaKnown RBP12.09□□□□□ -0.47
LDB3-209ENST00000623056 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 GPR146Q96CH1 333 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 RAB40CQ96S21 281 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 FUT9Q9Y231 359 aa12.09□□□□□ -0.47
LDB3-209ENST00000623056 B4E171 279 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 PGLYRP1O75594 196 aaPredicted RBP12.08□□□□□ -0.48
LDB3-209ENST00000623056 TUSC2O75896 110 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 KBTBD11O94819 623 aa12.08□□□□□ -0.48
LDB3-209ENST00000623056 TSPAN7P41732 249 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms